Butyrate-producing bacterium SS3/4: CK3_00180
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Entry
CK3_00180 CDS
T02611
Name
(GenBank) 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
bprs
Butyrate-producing bacterium SS3/4
Pathway
bprs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bprs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CK3_00180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bprs03400
]
CK3_00180
Enzymes [BR:
bprs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CK3_00180
DNA repair and recombination proteins [BR:
bprs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CK3_00180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
DsrC
Glyco_hydro_98M
Motif
Other DBs
NCBI-ProteinID:
CBL39911
UniProt:
D7GQ36
LinkDB
All DBs
Position
complement(5774..6670)
Genome browser
AA seq
298 aa
AA seq
DB search
MISKNLKNFNLRQIADSGQCFRMIPCAPNDPQTAYRVISSGHFLIVEQNRDEVIFHCPDD
ESAFWDHYFDLGTDYGAYIRAVDPADEYLSKAAAFGSGIRILNQDLWEMIITFIISQQKT
IPAIRALVEALSEKYGTRYELSSGYYYAFPTPEELNHASLDDLLALKLGYRAKYIKRTCE
DVCSGKMDLDRLRGLNYSDSMEALLSCYGIGVKVANCICLFGLHHIGAFPVDTWIKKILL
REYAPKSRCTSHVPESRLCAALIEENFSKYPGFAGVLQQYIFFYEREFSSKAAQTANV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaaaaaacttaaagaacttcaacctccgccagatcgccgactccggtcagtgt
ttccgtatgattccctgtgccccgaatgatccgcagacggcttaccgggtcatcagcagc
ggacattttcttattgtggagcagaatagagatgaggtgatttttcactgtcccgatgac
gagtctgcattctgggatcattattttgatcttgggacggattatggtgcttatatccgc
gctgttgaccctgcggatgaatatctttcaaaagcggcggctttcggcagtggaatacgg
atcctgaaccaggatctctgggagatgatcatcacctttattatctcacaacaaaagaca
attccggcgatccgagcgctagtggaggcgctgagtgagaaatatggaacgcggtatgag
ttgtcttccggatattattatgcgtttccaactcctgaagagttaaaccacgcctctctg
gatgacctcctcgccttaaaactcggttaccgtgccaagtatatcaagcggacctgcgaa
gacgtctgctccggaaagatggatcttgaccgtctgcggggactgaattattccgactcc
atggaagctcttctctcctgctacggaataggcgtcaaagttgccaactgcatctgcctc
ttcggtctgcaccatatcggtgccttcccggtggacacctggatcaaaaagatcctgctg
cgggagtatgccccgaaaagccgctgcaccagtcatgttcccgaatcacggctctgcgcg
gcgctgatcgaagaaaatttctcgaaatatccggggttcgccggtgtgctgcagcagtat
atcttcttttatgagagagagttctcatcaaaagcagcccagactgctaacgtctag
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