Butyrate-producing bacterium SS3/4: CK3_09500
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Entry
CK3_09500 CDS
T02611
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bprs
Butyrate-producing bacterium SS3/4
Pathway
bprs03030
DNA replication
bprs03430
Mismatch repair
bprs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bprs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CK3_09500
03430 Mismatch repair
CK3_09500
03440 Homologous recombination
CK3_09500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bprs03032
]
CK3_09500
03400 DNA repair and recombination proteins [BR:
bprs03400
]
CK3_09500
Enzymes [BR:
bprs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CK3_09500
DNA replication proteins [BR:
bprs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CK3_09500
DNA repair and recombination proteins [BR:
bprs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CK3_09500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
DUF1572
Motif
Other DBs
NCBI-ProteinID:
CBL40706
LinkDB
All DBs
Position
961163..961906
Genome browser
AA seq
247 aa
AA seq
DB search
MADEMINSYVALDLETTGIGARHEKITEIGMVKVIDGETTDTYHTMVNPHREIPKRIVEL
TGITDDMVKDAPGIEEILDEVLAFTEDLPLLGHQIIFDYGFLVQAAVNQKRKFEKYGVDT
LKLCRYLMPGEEKKNLSAACAYFEVTQDTAHRALSDAYAAHNLYQELKKRFGKERPELFT
AKMLQYKAKKERTASKRQKEHLQDLLKYHRIDITVEIDHMSGNEISRMIDKIIFQYGRIP
ENAKKQG
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgaaatgataaattcttatgtcgccctggatcttgagacgacgggcatcggt
gcccgtcacgaaaagatcacggagatcggcatggtgaaggtgatcgacggtgagacgacg
gacacttaccacactatggtaaatccgcaccgggagatcccgaagcggatcgtggagctg
acggggatcactgatgatatggtgaaggatgcaccgggaatcgaggagatcctggatgag
gtcctggccttcaccgaagacctcccgcttctcggccaccagatcatttttgactacggc
ttcctcgtacaggccgcagtgaaccagaaacggaaattcgagaaatacggggtcgataca
ctgaaactctgccggtatctgatgccgggggaggaaaagaagaatctgagtgccgcctgc
gcgtactttgaggttacccaggatacggcacaccgggcactttccgatgcctatgccgcc
cacaatctataccaggaactgaaaaaaaggtttggcaaagaacgtccggaactcttcact
gccaaaatgctccaatataaggcaaaaaaggaacggacggcgtcgaaaaggcaaaaagaa
cacttgcaggatttactaaaatatcatagaatagacataactgtcgagatcgatcacatg
tccggaaatgagatatcccggatgatcgacaagattattttccagtatggaagaatcccg
gaaaatgcgaaaaaacagggatag
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