Butyrate-producing bacterium SS3/4: CK3_10450
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Entry
CK3_10450 CDS
T02611
Name
(GenBank) helicase, putative, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bprs
Butyrate-producing bacterium SS3/4
Pathway
bprs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bprs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CK3_10450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bprs03400
]
CK3_10450
Enzymes [BR:
bprs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CK3_10450
DNA repair and recombination proteins [BR:
bprs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CK3_10450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
AAA_22
HHH_5
T2SSE
PIF1
UvrD-helicase
NTPase_1
HHH_2
nSTAND3
NPHP3_N
PhoH
SLFN-g3_helicase
SRP54
bpMoxR
AAA_28
AAA_16
AAA
FtsK_SpoIIIE
DEAD
AAA_7
AAA_5
ABC_tran
UvrD_C
STPRs
Motif
Other DBs
NCBI-ProteinID:
CBL40797
UniProt:
D7GSL0
LinkDB
All DBs
Position
1056966..1059212
Genome browser
AA seq
748 aa
AA seq
DB search
MATVTGYVERIKYRNEDNGYSVLSVADGGEEYILVGTFPYISEGERIEATGRMVEHSIYG
EQLAVESYEIKAPEDTLAIERYLGSGAIKGIGAALAKRIVKKFKADTFRIMEEEPERLAE
VKGVSERMAMEISSQVEEKRDMRQAMVFLQQYGISMNLAVKIYQHYGPGMYSVIQENPYQ
LADDIQGVGFKIADEIAAKVGIFTDSDYRIRSGLFYALLQATGNGHTYLPEEELFANASA
LLNVEPEHMEKHLVDLQMEKKLVVKEKDEKRIVYPAQFYYMELNTARMLHDLNLHSKIDE
DDVKKRLKKITEAEKIELDELQEQAVMEAVGNGLLIITGGPGTGKTTTINTIIHYFDQED
MDILLAAPTGRAAKRMTEATGYEAKTIHRLLELTGAPTVDQKNNGNSGENRLEGMHFERN
EENPLDADVIIIDEMSMVDISLIHSLLKAVNVGTRLILVGDVNQLPSVGPGNVLRDMIAS
EAFPVVKLTKIFRQAAQSDIIVNAHKINDGEAVPLNKKSRDFLFIRRDYPADIVKDMMVL
VQDKLPNYVHAEMSDIQIMTPMRKGALGVEALNKQLQEKFNPPAPNKQEKESGGTIFRVG
DKVMQIKNNYQIEWEVRNRYGIPVDKGEGVFNGDTGIIRSINSFAETMEVEFDERRMVEY
SFKQLEELELAYAITIHKSQGSEYPAVVIPVHSGPRMLMTRNLIYTAVTRAKSCVCLVGI
PEVFQAMVDNEVEQKRYSGLKDRILEIT
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgtaacaggctatgtggaaagaatcaaataccgcaacgaggataacggttac
tcggtcttaagcgtggcggacgggggagaagaatatatcctcgtcggtacatttccctac
atcagtgagggagagcggatcgaggcgacgggccggatggtggaacactccatctacggt
gaacagcttgcggtggagagctatgagataaaagctcccgaggacacactggcgattgaa
cggtatctcggctccggtgctatcaaaggcatcggagctgctttagctaaaaggatcgta
aagaagttcaaggcggacaccttccggattatggaagaggagccggaacgtctcgccgag
gtcaagggtgtcagcgagcgcatggcgatggagatcagcagccaggtggaggaaaaaaga
gatatgcgtcaggccatggtgttccttcagcagtacgggatctccatgaaccttgcagtg
aagatctatcagcattacggtccgggaatgtactcggtcatccaggaaaatccgtatcag
ctggcggacgatatccagggggtgggatttaagatcgcggacgagatcgcggcgaaggtc
gggatcttcacggattccgattaccggatccgcagcggacttttctacgccctgctccag
gcgacgggaaacggccatacatatctgccggaggaggagctgtttgccaacgcatcggca
ctcttaaatgtggaaccggagcacatggaaaagcacctggtggatctccagatggagaag
aagctggttgtgaaggaaaaggatgagaagcggatcgtctacccggcgcagttctactat
atggaactcaatacggcgagaatgctgcatgacctgaatctccactcgaagatcgatgag
gacgacgtgaaaaaacggctcaaaaagatcacggaggcggagaagatcgagctggacgag
cttcaggagcaggcggtcatggaagctgtgggtaacggtctccttatcatcaccggaggt
ccgggaaccggtaagacgacaaccatcaacacgatcatccactatttcgaccaggaagac
atggacattcttctggctgccccgacgggccgtgcggcgaagcgcatgacggaggcgacg
ggatacgaggcgaagacaattcacagacttctggagcttacgggcgctccgacggttgat
cagaaaaacaacggcaattccggcgagaaccggctggagggcatgcattttgagcggaac
gaggagaatcctctggacgcggatgtgatcatcatcgatgaaatgtccatggtggatatc
agcctgatccactcactcttaaaggcggtgaatgtaggaacgaggctgatccttgtaggt
gatgtaaaccagcttcccagcgtgggaccgggaaatgttctccgggacatgatcgcgtcg
gaggcgttccctgtggtgaagctcacaaagatcttccgtcaggcggcccagagcgacatt
atcgtcaatgcccataagatcaacgacggggaagcggttcctttaaataagaagagccgt
gactttctgtttatccggcgcgattatccggcagatattgtgaaggatatgatggtcctc
gtgcaggacaagcttccgaactatgtccatgccgagatgtcggatatccagatcatgacg
ccgatgcggaaaggcgctctcggagtcgaggcgttaaataagcagcttcaggagaagttt
aacccgcctgcgccgaataagcaggagaaagagtccggcggaacgatcttccgtgtgggc
gataaggtcatgcagatcaagaacaactatcagatcgagtgggaggtccgcaaccgctac
ggaatcccggtggataagggcgaaggcgttttcaacggggatacggggatcatccgctcc
atcaacagcttcgcggagaccatggaggtggaattcgatgagcggcggatggtggagtac
agctttaagcagttggaggagctggagcttgcctacgcgatcacgatccacaaatcccag
ggaagcgaatatccggcagtggtgatcccggtccattcgggaccgcggatgctgatgacg
agaaacctgatctacacggcggttacgagggcgaaatcttgcgtctgcctcgtgggaatc
ccggaggtgttccaggcgatggtggataatgaggtggagcagaaacggtattcggggctg
aaagatcggattctggagataacatga
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