Butyrate-producing bacterium SS3/4: CK3_16260 Help Entry CK3_16260         CDS       T02611                                  Name (GenBank) RNA polymerase sigma-54 factor   KO K03092   RNA polymerase sigma-54 factor Organism bprs  Butyrate-producing bacterium SS3/4 Pathway bprs02020   Two-component system bprs02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:bprs00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     CK3_16260  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     CK3_16260  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:bprs03021]     CK3_16260 Transcription machinery [BR:bprs03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      CK3_16260 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_CBD Sigma54_DBD Sigma54_AID HTH_Crp_2 HTH_27 Sigma70_r4 PCI RepL MarR MarR_2 DUF2316 Motif Other DBs NCBI-ProteinID:  CBL41296 LinkDB All DBs Position complement(1634513..1635835) Genome browser AA seq 440 aa AA seqDB search MEIKTGISLQTKQQLSQLQVESLNILAMSMMELKDFLQNEEIENPLVEYTSGKEEAAPIT YKETERFYNGTDRDERRENELYEIEDSEKSLEDLVNTQLQWEQIGETERKIVDFCIQSLE QSGYLMIPPKDIAKDLGVAEEQVEEVLSMLKELEPQGLFASGLEECLLMQVRGMDEEELL SDIIRNHLQDIAEGKISTISRGLKISSAEVRKLIHVIKNLNPRPLNGIGGEKAQYILPDV ILEFQDGQWNIELNDKWTGNLQVSDFYIHMMETAQDEELKSYFENKLRRARFIMNAVEQR RTTILGITREILKRQEDYFLGKGQLKPMTLEDIGDVLEIHKSTVSRAIRDKYLRVPSGCV LFRSLFTTGIVSSDGNGDVSRNTVKTKLKELVAAEDKKKPWSDEQLAGLLQDAGMPISRR TVAKYRMELGIGGVFQRKDG NT seq 1323 nt NT seq  +upstreamnt  +downstreamnt atggagataaagacaggaatttcattgcagacaaagcagcagctttcgcagcttcaggta gagtctctgaatattctggcaatgtccatgatggagttaaaggattttctgcagaatgag gagatcgaaaatccgctggtggaatatacatcgggaaaagaagaagcagcgccgattacc tataaagagacggaacggttttacaatggtacagaccgggatgagagaagggaaaatgag ctgtacgagattgaggacagcgagaaatcattggaagaccttgtgaatacgcagctccag tgggagcagatcggggagacggaacgaaagatcgtggacttctgtatccagtccctggaa cagagtggatatctgatgattccgcctaaagatattgcgaaagatcttggagttgcggaa gaacaggtggaggaagttctctctatgttgaaggagctggagccgcagggactctttgcg tcaggacttgaagaatgtcttctgatgcaggttcgtgggatggacgaggaagaactcctg tccgacataataaggaaccatctccaagacatcgcggaaggaaagatcagcacgatctcg cggggcttgaaaatctcttcagcagaggtgagaaaactgatccatgtgatcaagaactta aatccgcgcccattaaatgggatcggcggtgagaaagcccaatatattctcccggatgtg atcctggagtttcaggatgggcagtggaacatcgaactgaatgataaatggactggaaat ctccaggtcagcgatttctacattcatatgatggagaccgcccaggatgaggaattaaaa tcatattttgagaataaactgcgcagagcccgctttattatgaacgcggtggagcagcgc agaacaacaattttgggaatcacacgggaaatcctgaaacgacaagaagattatttcctc ggaaaaggtcagctgaaaccgatgacactggaggatatcggcgatgtactggagatccac aaatccacggtcagccgcgcgatccgtgacaaatatctgagagtgccgtcgggatgtgtc ctgttccgcagcttatttacgactggaatcgtctcatcggacggaaacggcgatgtgagc agaaatacagtaaagacaaagctgaaagaactggttgcggcggaggataagaaaaagccc tggagcgatgaacagctcgcgggtctcttacaggatgcaggaatgccgatatcgagaaga accgttgccaagtaccggatggagcttggaattggaggcgtgttccagagaaaagatgga taa

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