Butyrate-producing bacterium SS3/4: CK3_16400
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Entry
CK3_16400 CDS
T02611
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bprs
Butyrate-producing bacterium SS3/4
Brite
KEGG Orthology (KO) [BR:
bprs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bprs03400
]
CK3_16400
Enzymes [BR:
bprs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CK3_16400
DNA repair and recombination proteins [BR:
bprs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CK3_16400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD-helicase
HAD
AAA_19
DUF3134
DEAD
Motif
Other DBs
NCBI-ProteinID:
CBL41310
UniProt:
D7GU18
LinkDB
All DBs
Position
complement(1650859..1654407)
Genome browser
AA seq
1182 aa
AA seq
DB search
MGLCIIAGGSGAGKTEYIYRKIIELSAKEPEGRFFVVTPEQATMQAQKEIVRLHPNHGTL
NIDIVSFERLAYRIFSELSLPQPEVLDDTGKNMVLRRLAGEKMDELTMFSSHLNRPGFIS
EIKSMLSELYQYGATPEDLKAQTAGEHVGQILAAKLSDMEVIFEAFREFTKEKYITLEEL
LDVLCQVADQSALLKDSTMVLDGYTGFTPVQYRLIGILLKLCRNVFVTVSATMEPGMDLT
AESDETDLFDMSRKMTGKLKQLAEENGAKIYQDLVFSKRPLVRFRNSPALDHLERTFFRY
PYTRYHGGEREIMLVQAKDPADEIDFITNRIEELVKKDGYRYRDIALVCGDLPGYGREIT
RSFEENRIPLFLDENRDVSGNPLIRLIQSALDILQKGFDYESMFRYLRTGLVTEETEAVD
RLEIYVRAMGIRGFAKWDAAWEKTFEGGENLNLVEMNAFREKIMEPLRVLRERCAGRGVP
VAVVTDALKELLETLGAEEKLEQFSERFADSGMDREAREYEEIYDLVIELFEKFKSLLGD
ECVSRREYAEILSAGFSELSVGMIPAGADRVVCGDLKRTRLDKIKVLFFLGVSQGVVPAD
HSKGGLFTDNEREILKKNSMELAPTAREEGFMERFYLYLMMTKPSDQLILSYPTVTAEGK
QTRPSGIIGEMKKRFPDLFIRETEAEKRPDVSVTAAGRAILSWLQEPDRLMDPENEKARE
LYSFLSSDEAKAKEMEDLAKAVAYSYKKGGIGRAAARELYGTLLRGSVTRMEGYAGCAYS
HFLNHGLGLRAGREYELDLSDMGNLFHQSLDTFFRNVRDHGKDFRTITDAERRALVKRAV
EEVSAKYRNTIMKSSARNAYLEKKVERITDRTVRALIYQIRKGDFEPEAFEVDVSTRIPL
KDGEAVNLRGRIDRMDVFEDEDKIYVKIMDYKSGSTSFDLALLYHGLQLQLVVYMDAALK
LQESRHPGKQAVPAGIFYYHIDDPVIDREDGMTDEEIEAGILRKLRMNGLVNSSLDVIRH
MDREIEKESDVIPVALKDGYVQELKSSVAGGKRFAHLTDYVNQKLREMGEEILDGNVAVD
PYKQGNRTACDYCPYHSVCGFDLKTDGYGFRRFKPMKAQEIWKEIDQEEDGEEMDSGAVE
DAADKVEPVQLDPGKTKKKTLEGIESGKKKSPGKENDGKEIL
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgggattatgcatcatcgccggcggttccggtgccggaaaaacagaatatatatacagg
aagatcatcgagctgtccgcgaaggaaccggagggcaggttttttgtggtgacgccggag
caggcgacgatgcaggcccagaaggagatcgtgagactccacccgaaccacgggacactg
aacatcgacatcgtgagctttgagcgcctggcttaccggatcttttcggagctctccctg
ccgcagccggaggtgctggacgatacgggcaaaaatatggtcctcagaaggcttgccggg
gaaaagatggacgagctcaccatgttttcctcccacttaaaccgcccgggatttatcagt
gagatcaagtccatgctttcggaactctaccagtacggggcaactccggaggacttaaag
gcgcagacagccggggaacatgtgggacagattctggctgcgaagctctcggatatggaa
gtgatctttgaggcgttccgggagtttacgaaggagaaatatatcacgctggaggaactt
cttgatgtgctctgccaggtggcggaccagtctgcccttttgaaggacagtaccatggtt
ttagacggctacacgggctttacgccggtccagtaccggcttatcgggattttactgaaa
ctttgccggaatgtctttgtgacggtgtccgcgacgatggagccggggatggatcttacg
gcagagtcggatgagacggatctttttgatatgagccggaaaatgacaggaaaattgaaa
cagctggcggaggaaaacggggcgaaaatttaccaggacctcgtcttttccaaacgcccg
cttgtgcggttccggaacagcccggctcttgaccatcttgagaggacgtttttccgctat
ccgtatacccggtaccacggcggagagagggagatcatgctggttcaggcaaaggacccg
gcggatgagatcgactttatcacgaaccggatcgaggagctggtgaaaaaggacgggtac
cgctaccgggatatcgccctggtctgcggggatcttccgggatatggccgtgagatcacg
agaagctttgaagagaataggatcccgttgttcttagatgaaaaccgggatgtgtcggga
aatccgctgatccggctgatccagagcgccctggatattttgcagaagggctttgactat
gagagcatgttccggtatctgaggaccgggctcgtgacagaggagacggaggccgtggac
cggctggagatctatgtgcgggccatggggatccggggatttgcgaagtgggacgcggcg
tgggagaagacctttgagggcggagaaaatttaaatcttgtggagatgaatgcgttccgg
gagaagatcatggaaccgctccgtgttttaagggagcgctgcgccggacggggagttccg
gtggcggtagtgacggatgccttaaaagagctcctggagaccctgggagccgaggaaaag
ctggaacagttttcggagaggttcgcggattccggcatggaccgggaggcgagggagtac
gaggagatctatgatcttgtcatcgagcttttcgagaagtttaagagcctgttgggcgat
gagtgcgtgtcaaggagagagtacgcggagatcctttccgcgggcttttcggagctctct
gtgggaatgatccccgcgggggcggaccgggtggtctgcggtgacctgaagagaacgaga
ctcgataagatcaaggtcctctttttcctcggtgtgagccagggcgtggttccggcggac
cactcgaaaggcggtctttttacggacaatgagagggagatcctaaagaagaattctatg
gagctggcaccgacggccagggaagagggctttatggagcggttttacctctatctcatg
atgacgaagccgtcggatcagctgatcttatcttacccgacggtgacggcggagggaaaa
cagacacggccgtccggaattatcggggagatgaaaaaacggttcccggacctctttatc
cgggagacggaagcggaaaaaagaccggatgtttctgtgacggcggcgggaagagccata
ctttcctggcttcaggagccggaccggctgatggatccggagaatgagaaggcgcgggag
ctttacagttttctgtcttccgatgaggcgaaagcgaaggagatggaagatctcgcgaaa
gccgtggcctattcttataagaaaggcggcatcggccgggcggcggcgagagagctctac
ggaacacttttaaggggcagtgtgacgagaatggaaggttacgctggatgcgcctactcc
cacttcctgaatcatggacttgggctccgggcgggaagggagtatgagctggacctctcc
gacatgggaaatctgttccaccagtccctggacacctttttccgcaatgtgcgtgaccat
ggaaaggatttccggaccatcacggacgcggagcggcgagctctcgtgaagcgggcggtg
gaggaagtctccgcgaagtaccggaacacgatcatgaagagttccgcgagaaacgcctac
ctggaaaaaaaggtggagcggatcacggaccggacggtgcgggcgctgatctaccagatc
cggaagggcgattttgagccggaggcgttcgaggtggatgtgagcacgcggatcccgctg
aaggatggggaagccgtgaaccttcgcgggcggatcgaccgcatggacgtgtttgaggat
gaggacaagatctatgtgaagatcatggactataagtcgggaagcacgtcctttgacctg
gcgcttttgtaccatgggctgcagcttcagcttgtggtctacatggacgcggcgttaaag
ctccaggagagccggcatccggggaaacaggcggttccggcgggaatcttctattaccat
atcgatgatcctgtgatcgaccgggaggacggaatgacggacgaggagatcgaggcggga
atcttaaggaagctccgcatgaatggtctcgtgaacagcagtctcgacgtgatccggcat
atggaccgggagatcgagaaggaatcagatgtgatcccggtggcactgaaggacgggtat
gtgcaggagttaaagtcctctgtggctggaggaaaacggtttgcccatttgacagattat
gtaaatcagaagctcagggagatgggcgaggagatcctggatggaaatgtggcagtggat
ccctacaagcaggggaaccggacggcgtgcgattactgtccgtaccacagtgtgtgtggg
tttgatctgaagactgatgggtatggattccggagatttaagcctatgaaggcacaggag
atctggaaggagatcgaccaggaagaagatggggaagagatggattccggtgcagtggaa
gatgctgcagataaggtcgagcctgtacagctggatcccggtaaaacgaagaagaaaact
ttagagggcatagaaagcgggaaaaagaaatcgcctggaaaagaaaatgacggaaaggag
attctgtaa
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