Butyrate-producing bacterium SS3/4: CK3_17000
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Entry
CK3_17000 CDS
T02611
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bprs
Butyrate-producing bacterium SS3/4
Brite
KEGG Orthology (KO) [BR:
bprs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bprs03016
]
CK3_17000
Enzymes [BR:
bprs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CK3_17000
Transfer RNA biogenesis [BR:
bprs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CK3_17000
Prokaryotic type
CK3_17000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
CBL41364
UniProt:
D7GU72
LinkDB
All DBs
Position
complement(1715175..1716077)
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AA seq
300 aa
AA seq
DB search
MYDGIINVYKEKGFTSHDVVAKMRGILGQRKIGHTGTLDPAAEGVLPVCAGKGTKLCDML
TDHDKTYRAVLLLGTETDTEDTTGTVLETKETSGLTENEVQDAVLSFIGDYAQVPPMYSA
LKVDGKKLYELAREGKTVERKARPVKIFDIQIEKMELPEVTMTVSCSKGTYIRTLCHDIG
AKLSVGGCMKELLRTKVGQFELSESLTLDELQKLKEEDRLAEAVLPVEEVFKELPEIRSD
TEELDKLLKNGNPFRSRAVKDVKGGDMFRVYHSDGTFIGVFKYDEEKHMYYPEKIFLGGN
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacggaattattaacgtatataaagaaaaaggattcacctcccacgatgtcgtg
gcgaaaatgcgggggatcctgggtcagagaaagatcggtcatacggggactctcgatccg
gcggcggaaggcgttcttccggtgtgcgccggaaaaggcacaaagctctgcgatatgctg
accgaccacgacaagacatacagggctgttcttcttctgggaaccgagacggacacggag
gacacgacgggtacggtgctggagacgaaagaaacatcgggcctcactgaaaacgaagtg
caggacgcggtcctctcctttatcggggattacgcccaggttccgccaatgtactcggca
ctcaaggtcgatggaaagaagctctatgagcttgcgcgagagggaaagactgtggagcgg
aaagcgcgcccggttaagatcttcgatatccagatcgagaagatggagctcccggaggtc
acgatgaccgtgtcctgctcaaagggaacttatatccgcaccctgtgccatgatatcggc
gcgaagctctccgtcggcggctgcatgaaggagcttcttcggacaaaggtgggccagttt
gagctctcagagagcctgacactggacgaacttcagaagttaaaagaggaagaccggctg
gcggaggccgtacttccggtggaggaagtcttcaaggaacttccggagatccgttcggat
acggaggagctcgataagctcttaaagaatggaaatccgttccgcagccgcgcagtaaaa
gatgtaaagggcggggacatgttccgcgtttatcattcggatggaacctttatcggggtg
tttaagtacgacgaagagaaacacatgtactatccggaaaaaatctttctgggaggaaat
tga
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