Butyrate-producing bacterium SS3/4: CK3_21760
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Entry
CK3_21760 CDS
T02611
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bprs
Butyrate-producing bacterium SS3/4
Pathway
bprs03030
DNA replication
bprs03430
Mismatch repair
bprs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bprs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CK3_21760
03430 Mismatch repair
CK3_21760
03440 Homologous recombination
CK3_21760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bprs03032
]
CK3_21760
03400 DNA repair and recombination proteins [BR:
bprs03400
]
CK3_21760
Enzymes [BR:
bprs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CK3_21760
DNA replication proteins [BR:
bprs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CK3_21760
DNA repair and recombination proteins [BR:
bprs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CK3_21760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
AAA_30
TIP49
AAA_5
AAA_16
AAA_18
AAA_14
ResIII
AAA_7
AAA_19
AAA_28
Mg_chelatase
AAA_assoc_2
TsaE
AAA_2
RCF1-5-like_lid
DUF815
YwqJ-deaminase
AAA_25
RNA_helicase
Spectrin_5
Rad17
PIF1
Motif
Other DBs
NCBI-ProteinID:
CBL41771
LinkDB
All DBs
Position
2227287..2229005
Genome browser
AA seq
572 aa
AA seq
DB search
MSYQALYRKWRPQVFADVKGQDHIVKTLQNQIGSGRIGHAYLFCGTRGTGKTTVAKILAR
AVNCEHPVDGSPCGECPSCKQILAGTSLNVVEIDAASNNGVENIREIREQVQYPPTEGKY
RVYIIDEVHMLSTGAFNALLKTLEEPPSYVIFILATTEVHKIPITVLSRCQRYDFRRITL
DTITARLKELTEAENMPVEDKALRYVAKAGDGSMRDALSLLDQCAAFHFGETLTYEHVLD
VLGAVDNSVFRDLFHAIRENRTKDCILKLEEMVVQGRELSQFVVDFIWFLRNLLLLRTAD
DAEDLLDMSEDNLTQLREDAALVDENTLMRYIRVFSELSNQIRFANQKRVLIELAFIKLT
KPEMEQSMDSVLERLEKLERMVEEMSAGGYVPVQTAGMDGDPMINAGQQIPPQAYAQPVY
SGAGAPGNGMVPSGQPAQNPADMQNQQGAGQNYEPRTVSLPKAQLEDLNMIRNEWGKIVR
DMGMSIRPSFRETVVEPAGDSCLCIVFNDPMNFAIGSRPSVLGDLERYVEQKYGKSLYFK
SRVRESGERMDTRYISDDELRENIHMDITIED
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatcaagcgttatacaggaaatggcgcccgcaggtattcgcggatgtaaaaggc
caggaccatatcgttaaaaccttacagaatcagatcggttccggcaggatcggtcacgcc
tatctcttctgcggaacccgcggaacaggtaaaacgacggtggcaaagatcctggcccgg
gcggtaaactgtgaacacccggtggacggaagcccctgtggggaatgtccaagctgtaag
cagatcttagctggaacatctttaaatgtggtagagatcgatgctgcgtccaacaacggc
gttgagaatatccgtgagatccgggaacaggttcagtacccgccgacggaaggaaaatat
cgtgtatacatcatcgatgaggtccacatgctgtccacaggcgcgttcaatgccctgtta
aagacacttgaggagccgccgtcctatgtgatctttatccttgcgaccacggaggttcat
aagatcccgatcacggtgctttccagatgccagagatatgatttccggcgcatcacgctg
gacacgatcacggcccggttaaaagaacttacggaagcggaaaacatgccggtggaggac
aaagcgctccgctatgtggcaaaagccggagacggctccatgcgagacgcattgagtctc
ctggaccagtgcgcggcgttccacttcggtgagacactgacctatgagcatgtgctggat
gttctcggcgctgtggacaacagcgtattccgggacctgttccacgcgatccgggagaac
cggacaaaggactgcatcctgaaactcgaggagatggtagtccagggccgggaactgtcc
cagtttgtagtggattttatctggttcctccgcaatctgctgcttttaaggacagcagat
gacgcggaagaccttttagatatgtcagaggataatctgacacagctgcgggaagatgcg
gcgcttgtagatgagaatacattgatgcggtatatccgcgtgttctcagaattgtcgaac
cagatccgcttcgcgaaccagaaacgtgtgctgatcgaactcgcgttcatcaagctcaca
aagccggagatggaacagagcatggattctgttctggaacggctggagaagctggagcgc
atggtggaggaaatgtccgcgggcggttatgttccggtacagactgccggaatggacggc
gatcccatgataaatgccgggcagcagatcccgccgcaggcatacgcgcagccggtctac
agcggcgctggtgcgccgggaaacggcatggtcccctcagggcagcctgcacagaatccg
gcagatatgcagaaccagcaaggtgcgggccagaattatgagccgaggaccgtatccctg
ccgaaagcccagctggaagatctcaacatgatccgcaacgagtggggaaagatcgtccgt
gatatgggcatgtccatccgccccagtttccgggagacggttgtggaaccggcgggcgac
agctgtctctgcatcgtattcaatgatccgatgaactttgccatcggaagccgcccgagt
gttctcggggacctggaacggtatgtggaacagaaatacggaaaatccctgtattttaaa
tcccgtgtccgggagagcggggaacggatggatacacgctacatcagcgatgatgagctg
agggaaaacatccatatggatatcacgatcgaagattag
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