Butyrate-producing bacterium SS3/4: CK3_27990
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Entry
CK3_27990 CDS
T02611
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bprs
Butyrate-producing bacterium SS3/4
Pathway
bprs03030
DNA replication
bprs03410
Base excision repair
bprs03420
Nucleotide excision repair
bprs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bprs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CK3_27990
03410 Base excision repair
CK3_27990
03420 Nucleotide excision repair
CK3_27990
03440 Homologous recombination
CK3_27990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bprs03032
]
CK3_27990
03400 DNA repair and recombination proteins [BR:
bprs03400
]
CK3_27990
Enzymes [BR:
bprs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CK3_27990
DNA replication proteins [BR:
bprs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CK3_27990
DNA repair and recombination proteins [BR:
bprs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CK3_27990
NER (nucleotide excision repair)
GGR (global genome repair) factors
CK3_27990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_2
Motif
Other DBs
NCBI-ProteinID:
CBL42308
LinkDB
All DBs
Position
complement(2815637..2818270)
Genome browser
AA seq
877 aa
AA seq
DB search
MEKLVLIDGHSILNRAFYGVPNLTNSEGLHTNAVYGFLNILFKVLDEEKADYLAVAFDLK
APTFRHKMFDAYKGTRKPMPEELHEQVPLMKEVLTAMGVPILTKEGYEADDILGTIAKRE
QKDGYEVTILSGDRDLLQLSDTHIRICLPKTSRGTTEVHNYYPEDVIREYQVTPEQFIEV
KALMGDQSDNIPGVPSIGEKTATNLIVQYQNLENIYTHLDEVKPPRAKKALEEHRDLAEL
SLKLARICVDAPIEFSMADAKLENLYTPEAYEYMKRLEFKSIAARFGEGIRNESGPEKQF
VLVEDFSEADALFEKAKKEERIGMELLAENGSVTALALSFEETGSYIFLVGGFMTESYIA
GKYEELCRTGHAWVLDLKHSLPFAKLSYGDTVYDAGVAAYLLNPLKDTYGYDDIARDVLG
MTVPSKTDLIKKMSYKDACAKEQDNFTRMAGLMAYTAFAAGKPLSERLAAEGMEDLYRNI
ELPLIYTLFHMEDEGIAVRREELTAYGGKLKKQIAVLEKEIWEMTGQEFNINSPKQLGEI
LFEKMQIKGGKKTKTGYSTAADVLEKLAPDYPVIQKILDYRQYTKLNSTYADGLGTYIKE
DGRIHSRFNQTITATGRISSTEPNLQNIPIRMELGREIRKVFVPRNGFLFLDADYSQIEL
RVLAHMSGDERLIEAYKTAQDIHAITASQVFHIPLNEVTPLQRRNAKAVNFGIVYGISAF
GLSEDLSISRKEAMEYIERYFETYPQVKSFLDSLVAHAKEQGYVTTMFGRRRPVPELKSS
NFMQRSFGERVAMNSPIQGTAADIIKIAMIRVDERLRRENLRSRLILQVHDELLIETAED
EKETVMKILSEEMHHAASLKVELEIDMHGGKNWFEAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacttgtactgatcgacggtcatagcatcttaaaccgcgcgttctacggagtg
ccgaacctgacaaactcggaaggtctccacacgaacgcggtctatggttttttaaatatc
ttattcaaggttctcgatgaggagaaagcggactacctggcggtggcctttgacttaaaa
gcgccgaccttccgacataagatgttcgacgcctacaagggaacaagaaaaccgatgccg
gaggagcttcacgagcaggtaccgcttatgaaggaagttctgacggccatgggtgttccg
atcctcacaaaagagggatatgaggcggacgatatccttggaaccatcgcgaaacgtgag
cagaaagacggatatgaggtgacgatcctctccggagaccgggatcttttacagctttcc
gatacccatatccggatctgtcttccgaagacaagccgtggaaccacagaagtacacaac
tattacccggaggacgtgatccgggagtaccaggtaacaccggagcagtttatcgaggtg
aaggccctgatgggcgaccagtctgacaatatcccgggggttccgtccatcggtgagaag
acggcgacaaacctgatcgtgcagtatcaaaatctggaaaacatctatacccatctcgac
gaggtgaaaccgccccgcgcgaaaaaggcgctggaggagcacagagatcttgcggagctt
tccctgaagcttgcaaggatctgtgtcgatgcccccattgagttttccatggcggacgcg
aagttagagaatctctacacgccggaagcttacgaatacatgaagcgtctggagttcaag
tccatcgcagcgagattcggcgaggggatcaggaatgagagcggaccggagaagcagttt
gtcctcgtggaagatttctcagaggcggacgcgctctttgaaaaggcaaaaaaagaagag
cgcatcggcatggagcttctggcggagaacggctccgtgacagctctcgctttaagcttt
gaggagaccggaagctatattttcctggtcggaggttttatgacggagagctatatcgcc
ggaaagtacgaagagctctgccgcacaggccatgcctgggtgctggatctcaagcattct
ttgccgtttgcgaagctttcctacggggataccgtttacgatgcgggtgtcgcggcgtac
cttttaaatccgttaaaggacacctatgggtacgatgacattgcgagggatgttctcggc
atgacggtcccgtcaaagacagacctgatcaaaaagatgtcctataaggacgcctgcgcg
aaagaacaggataattttacgcgcatggcgggacttatggcatacaccgcttttgccgcc
gggaaaccgctctcagagcgtctggcagcagaaggaatggaggacctgtaccggaatatc
gagcttccgctgatctatacgttattccacatggaagatgagggaattgcggtccgccgg
gaagaactcaccgcctacggcgggaaattgaagaaacagatcgccgttctcgagaaggag
atctgggagatgacaggacaggagttcaatatcaactccccgaaacagttaggcgagatc
ctgtttgagaagatgcagatcaagggcggaaagaagacaaagaccggctattcaacagcg
gcagatgtccttgaaaagctcgccccggattacccggtgatccagaagatcttagattac
aggcagtatacaaagttaaattccacctacgcggacggtctgggaacatatatcaaagag
gatggccggatccacagccgctttaaccagacgatcacggcgacaggccggatctccagc
acggagccgaacctccagaacattccgattcgcatggagcttggacgggagatacggaag
gtctttgtgccgcggaacggattcctgttcctggatgctgactactcccagatcgagctg
cgcgtcctcgcccacatgtccggcgatgagcgtctgatcgaggcatataagactgcccag
gatatccacgccatcacggcgtcccaggtgttccatatcccgttaaacgaggtgacacca
ctgcagcgccgcaacgcgaaggccgtgaacttcgggatcgtgtacgggatcagtgccttt
ggactcagcgaggacctgagcatctccagaaaagaggccatggagtatatcgagcggtat
tttgagacttacccacaggtcaagtcatttcttgacagccttgtggctcacgcaaaggaa
caggggtacgtcaccaccatgttcggacgccgccgcccggtgccggagttaaaatcctcg
aacttcatgcagcgttccttcggcgagcgcgtggcgatgaactccccgatccaggggacc
gctgccgatatcatcaagatcgccatgatccgggtggatgagagactgagaagagagaac
ctccgctccaggctgatcctgcaggtacacgatgagcttctcatcgagacggcggaggac
gagaaggagacagttatgaagatcctgtccgaggagatgcatcatgcggcatccttaaag
gtggagttagagatcgacatgcatggcggaaagaactggtttgaggcgaaataa
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