KEGG   Butyrate-producing bacterium SS3/4: CK3_27990
Entry
CK3_27990         CDS       T02611                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
bprs  Butyrate-producing bacterium SS3/4
Pathway
bprs03030  DNA replication
bprs03410  Base excision repair
bprs03420  Nucleotide excision repair
bprs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bprs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CK3_27990
   03410 Base excision repair
    CK3_27990
   03420 Nucleotide excision repair
    CK3_27990
   03440 Homologous recombination
    CK3_27990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bprs03032]
    CK3_27990
   03400 DNA repair and recombination proteins [BR:bprs03400]
    CK3_27990
Enzymes [BR:bprs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CK3_27990
DNA replication proteins [BR:bprs03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CK3_27990
DNA repair and recombination proteins [BR:bprs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     CK3_27990
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CK3_27990
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_2
Other DBs
NCBI-ProteinID: CBL42308
LinkDB
Position
complement(2815637..2818270)
AA seq 877 aa
MEKLVLIDGHSILNRAFYGVPNLTNSEGLHTNAVYGFLNILFKVLDEEKADYLAVAFDLK
APTFRHKMFDAYKGTRKPMPEELHEQVPLMKEVLTAMGVPILTKEGYEADDILGTIAKRE
QKDGYEVTILSGDRDLLQLSDTHIRICLPKTSRGTTEVHNYYPEDVIREYQVTPEQFIEV
KALMGDQSDNIPGVPSIGEKTATNLIVQYQNLENIYTHLDEVKPPRAKKALEEHRDLAEL
SLKLARICVDAPIEFSMADAKLENLYTPEAYEYMKRLEFKSIAARFGEGIRNESGPEKQF
VLVEDFSEADALFEKAKKEERIGMELLAENGSVTALALSFEETGSYIFLVGGFMTESYIA
GKYEELCRTGHAWVLDLKHSLPFAKLSYGDTVYDAGVAAYLLNPLKDTYGYDDIARDVLG
MTVPSKTDLIKKMSYKDACAKEQDNFTRMAGLMAYTAFAAGKPLSERLAAEGMEDLYRNI
ELPLIYTLFHMEDEGIAVRREELTAYGGKLKKQIAVLEKEIWEMTGQEFNINSPKQLGEI
LFEKMQIKGGKKTKTGYSTAADVLEKLAPDYPVIQKILDYRQYTKLNSTYADGLGTYIKE
DGRIHSRFNQTITATGRISSTEPNLQNIPIRMELGREIRKVFVPRNGFLFLDADYSQIEL
RVLAHMSGDERLIEAYKTAQDIHAITASQVFHIPLNEVTPLQRRNAKAVNFGIVYGISAF
GLSEDLSISRKEAMEYIERYFETYPQVKSFLDSLVAHAKEQGYVTTMFGRRRPVPELKSS
NFMQRSFGERVAMNSPIQGTAADIIKIAMIRVDERLRRENLRSRLILQVHDELLIETAED
EKETVMKILSEEMHHAASLKVELEIDMHGGKNWFEAK
NT seq 2634 nt   +upstreamnt  +downstreamnt
atggaaaaacttgtactgatcgacggtcatagcatcttaaaccgcgcgttctacggagtg
ccgaacctgacaaactcggaaggtctccacacgaacgcggtctatggttttttaaatatc
ttattcaaggttctcgatgaggagaaagcggactacctggcggtggcctttgacttaaaa
gcgccgaccttccgacataagatgttcgacgcctacaagggaacaagaaaaccgatgccg
gaggagcttcacgagcaggtaccgcttatgaaggaagttctgacggccatgggtgttccg
atcctcacaaaagagggatatgaggcggacgatatccttggaaccatcgcgaaacgtgag
cagaaagacggatatgaggtgacgatcctctccggagaccgggatcttttacagctttcc
gatacccatatccggatctgtcttccgaagacaagccgtggaaccacagaagtacacaac
tattacccggaggacgtgatccgggagtaccaggtaacaccggagcagtttatcgaggtg
aaggccctgatgggcgaccagtctgacaatatcccgggggttccgtccatcggtgagaag
acggcgacaaacctgatcgtgcagtatcaaaatctggaaaacatctatacccatctcgac
gaggtgaaaccgccccgcgcgaaaaaggcgctggaggagcacagagatcttgcggagctt
tccctgaagcttgcaaggatctgtgtcgatgcccccattgagttttccatggcggacgcg
aagttagagaatctctacacgccggaagcttacgaatacatgaagcgtctggagttcaag
tccatcgcagcgagattcggcgaggggatcaggaatgagagcggaccggagaagcagttt
gtcctcgtggaagatttctcagaggcggacgcgctctttgaaaaggcaaaaaaagaagag
cgcatcggcatggagcttctggcggagaacggctccgtgacagctctcgctttaagcttt
gaggagaccggaagctatattttcctggtcggaggttttatgacggagagctatatcgcc
ggaaagtacgaagagctctgccgcacaggccatgcctgggtgctggatctcaagcattct
ttgccgtttgcgaagctttcctacggggataccgtttacgatgcgggtgtcgcggcgtac
cttttaaatccgttaaaggacacctatgggtacgatgacattgcgagggatgttctcggc
atgacggtcccgtcaaagacagacctgatcaaaaagatgtcctataaggacgcctgcgcg
aaagaacaggataattttacgcgcatggcgggacttatggcatacaccgcttttgccgcc
gggaaaccgctctcagagcgtctggcagcagaaggaatggaggacctgtaccggaatatc
gagcttccgctgatctatacgttattccacatggaagatgagggaattgcggtccgccgg
gaagaactcaccgcctacggcgggaaattgaagaaacagatcgccgttctcgagaaggag
atctgggagatgacaggacaggagttcaatatcaactccccgaaacagttaggcgagatc
ctgtttgagaagatgcagatcaagggcggaaagaagacaaagaccggctattcaacagcg
gcagatgtccttgaaaagctcgccccggattacccggtgatccagaagatcttagattac
aggcagtatacaaagttaaattccacctacgcggacggtctgggaacatatatcaaagag
gatggccggatccacagccgctttaaccagacgatcacggcgacaggccggatctccagc
acggagccgaacctccagaacattccgattcgcatggagcttggacgggagatacggaag
gtctttgtgccgcggaacggattcctgttcctggatgctgactactcccagatcgagctg
cgcgtcctcgcccacatgtccggcgatgagcgtctgatcgaggcatataagactgcccag
gatatccacgccatcacggcgtcccaggtgttccatatcccgttaaacgaggtgacacca
ctgcagcgccgcaacgcgaaggccgtgaacttcgggatcgtgtacgggatcagtgccttt
ggactcagcgaggacctgagcatctccagaaaagaggccatggagtatatcgagcggtat
tttgagacttacccacaggtcaagtcatttcttgacagccttgtggctcacgcaaaggaa
caggggtacgtcaccaccatgttcggacgccgccgcccggtgccggagttaaaatcctcg
aacttcatgcagcgttccttcggcgagcgcgtggcgatgaactccccgatccaggggacc
gctgccgatatcatcaagatcgccatgatccgggtggatgagagactgagaagagagaac
ctccgctccaggctgatcctgcaggtacacgatgagcttctcatcgagacggcggaggac
gagaaggagacagttatgaagatcctgtccgaggagatgcatcatgcggcatccttaaag
gtggagttagagatcgacatgcatggcggaaagaactggtttgaggcgaaataa

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