Butyrate-producing bacterium SS3/4: CK3_28110
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Entry
CK3_28110 CDS
T02611
Name
(GenBank) Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bprs
Butyrate-producing bacterium SS3/4
Brite
KEGG Orthology (KO) [BR:
bprs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bprs03032
]
CK3_28110
03400 DNA repair and recombination proteins [BR:
bprs03400
]
CK3_28110
Enzymes [BR:
bprs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CK3_28110
DNA replication proteins [BR:
bprs03032
]
Prokaryotic type
DNA Topoisomerases
CK3_28110
DNA repair and recombination proteins [BR:
bprs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CK3_28110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CBL42320
UniProt:
D7GWX8
LinkDB
All DBs
Position
complement(2832331..2834577)
Genome browser
AA seq
748 aa
AA seq
DB search
MSEKILRTEYSEEMQKSYLDYSMSVITSRAIPDARDGLKPVQRRVLYDMSELHLDHDKPH
RKSARIVGDTMGKYHPHGDSSIYETLVVLSQDFKKGMALVDGHGNFGSIEGDGAAAMRYT
EARLKKFAEEVYLKDLDKTVDFVSNYDETEKEPEVLPVRVPNLLVNGAEGIAVGMSTSIP
PHNLGEVIDAVKAYIDNRLLTVEELMQYMPGPDFPTGGIIANKGDLLQIYETGAGKIRLR
GRIEVELGRRKADRDKLVITEIPYTMIGAGINKFLMDVADLVETRKLTDVVDISNQSSKE
GIRIVLELKKDADVNRIKAILYKKTKLEDTYGVNMLAIDEGRPETMNLKQILNTFLEFQY
RNMTKKYNVLLQKEMEKKEVQEGLIEACDVIDLIIAVLRGSKNMKDAKECLMTGNTEKIK
FRVPGFEADAKNLHFTERQATAILEMRLYKLIGLEILALQKAYKETLRKIREYKHILSNQ
KNMDVVIKEDLDSIKAEFAEPRRTLIEDGEEMVYVEAKEEAKEVIFVMDRFGYCKTMDRS
IYERNQETVDSENVWVLPVMTDDKLCMFSDTGNMYQVKVAEFPTLKMKDKGIPIENVSKF
DGKTETILFMLPASGFTGKKFLFATAQAAVKIVPGEEFITANKTVVATKLAGEDKLTEIR
EIGTEIDGTRDVVLQTVDGMFLKFQLEEIPELKKNSRGVRGIRLEKEDTLEHVYLPDMDG
TAVYKGKEVALGRLKVAKRDGKGTKIRL
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaaatattgcgaactgaatattcggaggaaatgcagaagagctatctggac
tactccatgagcgtcatcacctcccgtgcgatcccggatgccagagatggtttaaagccg
gtacagcgccgtgtcctctatgatatgagtgagcttcacttagatcacgataagccccac
agaaagtcggcacgtatcgttggcgataccatgggtaaataccacccgcacggcgacagt
tctatctacgagactctggttgtcctgtcccaagactttaaaaagggaatggcactggtg
gacggacacggaaattttggctccatcgagggcgacggagccgctgccatgcgatacacc
gaggcgcgcttaaagaaatttgcggaggaagtctacttaaaagacctcgataagacggtg
gatttcgtctccaactacgatgagacggagaaggagccggaggtccttccggtccgcgtg
ccgaaccttctcgtaaacggtgccgagggaatcgctgtcggcatgagcaccagcattcca
ccccacaatttaggggaagttatcgacgcggtaaaggcctatatcgataaccggcttctc
accgtagaagagttgatgcagtatatgccgggaccggatttccccaccggtgggattatc
gcaaataagggcgatcttttacagatctatgagaccggtgccggaaagatcaggctccgc
ggaagaatcgaggttgagctcggaagaagaaaggcagaccgtgacaaactggtgatcacg
gagatcccatacacgatgatcggtgcgggaatcaacaagttcctcatggatgtggcagat
ctcgttgagacgagaaagctcaccgacgtggttgatatctcaaaccagtccagcaaagaa
gggatccgcatcgtcctggaattaaagaaggacgcggatgtcaataggatcaaggcaatc
ctctataagaagacaaagcttgaggacacctacggcgtcaacatgctggctatcgacgag
ggacgcccggagaccatgaacctcaaacagatcttaaatacgttcctggagttccagtac
cggaacatgacgaagaagtacaatgttcttctccagaaggaaatggaaaagaaggaagtg
caggaaggccttatcgaggcgtgcgatgtgatcgacctcattattgccgttctccgggga
tcaaagaacatgaaggacgcgaaggaatgcctgatgaccggaaatacggagaagatcaag
ttccgtgtgccgggctttgaggcggatgcgaagaatcttcactttactgagcgccaggcg
acggcgatcctggagatgcgtctctacaagctcatcggtcttgaaatccttgcgctccag
aaagcatacaaggagacattgcggaagatccgtgaatataagcatattctttccaaccag
aagaatatggatgtggtgatcaaggaagaccttgactccatcaaggcagagttcgcagaa
ccgagaaggacactcatcgaggacggcgaagagatggtttacgtggaggcgaaggaagag
gcgaaggaagtgattttcgtcatggaccgtttcggctattgcaagaccatggaccgctcc
atctacgagaggaaccaggagaccgtggacagcgagaatgtctgggtacttccggtgatg
acggacgataagctctgcatgttctcagataccggaaacatgtaccaggtgaaggttgcg
gagtttccgacactgaagatgaaagacaagggaatccccatcgagaacgtcagcaaattt
gatgggaagacggagacgatcctctttatgcttccggcatccggatttaccggtaagaaa
ttcctgttcgcgacggcccaggcggcggtgaagatcgttccgggagaggaatttataacg
gcaaataagaccgttgtggcgacgaaattagcgggagaggataagctcacggagatccgg
gagatcggcactgagatcgatggaacccgcgatgtggttctccagactgtcgacggcatg
ttcttaaaattccagctggaagaaattccagagctcaagaagaacagccgtggtgtgcgg
ggcatcaggcttgaaaaggaagatacgctggaacatgtatatctgccggatatggacgga
actgctgtctataaaggaaaagaagttgcccttggccggttgaaggtggcaaagagggat
ggaaaaggaacgaaaatccggttataa
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