Butyrate-producing bacterium SS3/4: CK3_33300
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Entry
CK3_33300 CDS
T02611
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
bprs
Butyrate-producing bacterium SS3/4
Pathway
bprs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bprs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CK3_33300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bprs03400
]
CK3_33300
Enzymes [BR:
bprs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
CK3_33300
DNA repair and recombination proteins [BR:
bprs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CK3_33300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
CBL42742
LinkDB
All DBs
Position
complement(3364591..3365424)
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AA seq
277 aa
AA seq
DB search
MFYIGCHLSSAKGFLAMGKDAEKIGATTFQFFTRNPRGGSAKPLDHEDIAAFLKLKEELG
LGTLVAHAPYTLNGCSADEKIRDFAKRTMADDLERMEAVPGNLYNFHPGSHVKQGVEVGI
TYIAEMLNEILKPELHTTVLLETMAGKGSEVGRSFEELREILDRVELSDKMGVCMDTCHV
WDAGYDIVNDLDGVLAEFDRVVGLERLKAVHLNDSMNVRGAGKDRHARIGEGEIGAEAIV
RVINHPALRNLPFCLETPNELPGYAAEIRFLKDHRIG
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgttttatatcggatgccatctttcctcggcgaagggattccttgccatgggaaaggac
gcggaaaagatcggcgcgacgacgtttcagttttttacaaggaatcccaggggcggaagc
gcgaagccgttagaccatgaggacatcgcagcgtttctgaaactaaaagaggagctgggg
ctggggactctggtggcccatgcgccatacacactgaacggctgctcagcggatgaaaaa
atccgggatttcgcgaagcggaccatggcggatgacctggagcgcatggaggcggttccc
ggaaacctctacaatttccatccgggaagccatgtgaagcagggtgtggaggttggaatc
acctatatcgcggagatgttgaatgagatcctgaagccggagcttcacaccacggtgctc
ctggagaccatggcgggaaagggcagcgaggtcggaagaagttttgaggaacttcgggaa
attcttgacagagttgaactttctgataagatgggtgtatgtatggatacctgtcatgta
tgggatgccggatatgacatcgtgaatgatctcgacggagtgctggcggaatttgaccgt
gttgtggggcttgaacgcctgaaagcggtccatttaaatgacagcatgaatgtccgggga
gccgggaaggaccgccacgcccggatcggggaaggtgaaattggcgcggaggcaattgtg
cgggtgatcaaccatccggcgctgaggaatctgccgttctgtctggagacgccgaacgag
cttccgggatatgcggcggagatcaggttcttgaaagatcatagaatcggataa
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