Burkholderia pseudomallei K96243: BPSL1283
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Entry
BPSL1283 CDS
T00203
Name
(GenBank) putative exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
bps
Burkholderia pseudomallei K96243
Pathway
bps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BPSL1283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bps03400
]
BPSL1283
Enzymes [BR:
bps01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BPSL1283
DNA repair and recombination proteins [BR:
bps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BPSL1283
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
UvrD_C_2
DUF374
Motif
Other DBs
NCBI-ProteinID:
CAH35277
UniProt:
Q63VG2
LinkDB
All DBs
Position
1:1490354..1494166
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AA seq
1270 aa
AA seq
DB search
MSHVAPSGPSASELDVFACPLDGVNQIEASAGTGKTWNICALYVRLLLEKDLGADEILVV
TFTKAATAELHERIRARLAQLAHALDTGDDGGDPFIARLFETTLAPERGLDPQTAAKRVR
RALRAFDQAAIHTIHAFCQRALQEAPFAAAMPFAFEMEADDGALRFELAADFWRTRVEPV
AAAYPAFAEWLVEYGAGPAALDAQLARRLKKPLARLRWDGLHAADDGAESAARAHFDTAA
AIWRDERGVLGTLLADAQPSLNQRSHKPEAVSEALDAWARYFEQASAVAALPRAALKLTQ
SALEKATKKGGATPRHAFFDVAQALEAAVAALEAAQRARWLSLVEQWLDAAPAELAQRKR
TRRVVSFDDLLANLYRALDAHPWLRETLRARYPAALIDEFQDTDPLQFAIFDTIFAPAGP
LFLVGDPKQAIYSFRAADLHTYLAARARASARYTLAVNQRSTPAIVGACNRVFGANPRAF
VLDGLDYEPVRAGSRVRAPLVDATDPLAGAGDFRIWTLPAGDDVLTKRDAQRHAAHACAA
EIARLMRGARERAVTLGGEPLAASGIAVLVQTHRQGSLVKRVLAAWGIGSVELAQASVFA
TIDAEQLERVLAAIDAPGDLRRLRSALASDWFGLDAAALWRLEQGDAEQDGIDAAARGAS
GNGGGARAASAGAPAPSPADADAMGWVERFSRYRLLWRERGFAVMWRTLAGELRIAERLM
AGADGERRVTDVNHLAELTQARASAQPGIAPTLRWLAAQRLEGGGDDAQLRLESDRNLVQ
IVTVHKSKGLEYAIVFCPFLNDGGLREPAGSGLPDAREYHDESGCAVLHYGCDDEAAERA
SREAVREQAAERARLVYVALTRAVYRCYLVAGTYQSSRSTKEARRSVLNWLVAGAGRDFD
AWLKEPPEDAELAERWQALAGGPVTLGALPVPAHREPLAAGHDAQATRAARRATRGLRDA
WRIASFSSLASAIARDESGIARAADDEMRPDHDALAAALGADALEPPDAAAAIAPAPAAA
PRELAEDDILAFPRGAAAGECLHRLLELSNFADASTWPPAALRALHERPVEAELALAERL
PAMMTRLVADLAATELVPGMRLAALDPARRLTEMEFLFPAPALDFNALRRLLAAHGYPDV
ALEAGTLAGFVKGFIDMIVEHDGRFWIVDWKSNHLGTTPEAYGERALDAAMAHHAYHLQA
LLYMVALHRYLRVRMHGYDYDAHIAGYLYVFVRGVRPDWRNGGASAGVHARRPARALIEA
LDALMREGDA
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacgtcgcgccatccggcccgtcggcgagcgagctcgacgtgttcgcgtgtccg
ctcgacggtgtgaaccagatcgaggcgtccgcgggcaccggcaagacctggaacatctgc
gcgctgtacgtgcgcctgctgctcgaaaaggatctcggcgcggacgagattctcgtcgtc
acgttcacgaaggcggcgacggccgagctgcacgaacggattcgcgcgcgcctcgcgcag
ctcgcgcacgcgctcgacacgggcgacgacggcggcgatccgttcatcgcgcgcctgttc
gagacgacgctcgcgcccgagcgcgggctcgatccgcaaacggcggcgaagcgcgtgcgt
cgcgcgctgcgcgcattcgaccaggcggcgatccacacgatccacgcgttctgccagcgg
gcgctgcaggaagcgccgttcgcggcggcgatgccgttcgcgttcgagatggaagcggac
gacggcgcgctgcgcttcgagctggccgccgatttctggcgcacgcgtgtcgagcccgtc
gcggcggcctatccggcgttcgccgagtggctcgtcgagtacggcgcggggccggcggcg
ctcgacgcgcagctcgcgcggcggctgaagaagccgctggcgcgattgcgctgggacggc
ttgcacgcggccgacgacggcgcggaaagcgccgcgcgcgcgcacttcgatacggcggcc
gcgatctggcgcgacgagcgcggcgtgctcggcacgctgctcgccgacgcgcagccgtcg
ttgaaccagcgctcgcacaagccggaggcggtgagcgaggcgctcgacgcgtgggcgcgt
tatttcgagcaggcgagtgcggtggccgcgttgccgcgcgcggcgctcaagctcacgcag
tccgcgctcgagaaagcgacgaaaaagggcggcgcgacgccgcgccacgcgttcttcgac
gtcgcgcaggcgctcgaggcggctgtcgccgcgctcgaggccgcgcagcgcgcgcgctgg
ctgtcgctcgtcgagcaatggctcgacgcggcgcccgccgagctcgcgcagcgcaagcgc
acgcgccgcgtcgtatcgttcgacgatctgctcgcgaacctgtatcgcgcgctcgacgcg
catccgtggttgcgcgagacgctgcgcgcgcgctatccggccgcgctcatcgacgaattc
caggatacggacccgctgcagttcgcgatcttcgatacgatcttcgcgcccgccggcccg
ctctttctcgtcggcgatccgaagcaggcgatctacagcttccgcgcggcggacctgcac
acgtatctcgccgcgcgcgcgcgggcgtccgcgcgctacacgctcgcggtgaaccagcgc
tcgacgcccgcgatcgtcggtgcgtgcaaccgcgtgttcggcgcgaacccgcgcgcgttc
gtgctcgacgggctcgattacgaaccggtgcgcgcgggctcgcgcgtgcgcgcgccgctt
gtcgacgcgaccgatccgcttgccggcgcgggcgacttccgcatatggacgctgcccgcc
ggcgacgacgtgctgaccaagcgcgacgcgcagcggcacgccgcgcatgcatgcgcggcg
gaaatcgcgcggctgatgcggggcgcgcgcgagcgcgcggtgacgctcggcggcgagccg
ctcgcggcgtccggcatcgcggtgctcgtgcagacgcaccggcagggcagtctcgtgaag
cgcgtgctggccgcatggggtatcggcagcgtcgagctcgcccaggcgtcggtattcgca
acgatcgatgccgagcagctcgagcgcgtgctggccgccatcgacgcgccgggcgacctg
cggcgcctgcgctcggcgctcgcgtccgactggttcgggctcgatgcggcggcgctctgg
cgcctcgagcagggcgatgccgagcaggacggcatcgacgccgccgcccgcggcgcgagc
ggcaacggcggcggcgcgcgcgccgcatcggcgggcgcgcccgcgccgtcgcccgcggac
gccgatgcgatgggctgggtcgagcgcttctcgcgctaccggctgctgtggcgcgagcgc
ggcttcgcggtgatgtggcgcacgctcgccggcgagctgcgcatcgccgagcggctgatg
gcgggggcggacggcgagcggcgcgtgaccgacgtcaatcacctcgccgagctgacgcag
gcgcgtgcgtccgcgcagccgggcatcgcgccgacgctgcgctggcttgccgcgcagcgc
ctcgaaggcggtggggacgacgcgcagttgcggctcgaatccgaccgtaacctcgtgcag
atcgtcaccgttcacaagtcgaaggggctcgaatacgcgatcgtgttctgtccgttcctg
aacgacggcgggctgcgcgagccggccggctccggcctgcccgacgcgcgcgagtaccac
gacgaatcgggctgcgcggtgctgcattacggctgcgacgacgaagcggccgagcgcgcg
tcgcgcgaggcggtgcgcgagcaggcggccgagcgcgcgcggctcgtctacgtcgcgctc
acgcgcgccgtctatcggtgctatctggtcgcgggcacctatcagtcgtcgcgttcgacg
aaggaggcgcggcgcagcgtgctgaactggcttgtcgcgggcgcgggccgcgatttcgat
gcgtggctgaaggagccgcccgaagacgcggagctcgccgagcgctggcaggcgctcgcg
ggcggcccggtgacgctcggcgcgctgccggtgcccgcgcatcgcgagccgctcgcggcc
gggcacgatgcgcaggcgacgcgagccgcgcgacgtgcgacgcgtggcttgcgcgacgca
tggcggatcgcgagcttcagctcgctcgcatcggcgatcgcgcgcgatgagagcggcatc
gcgcgcgcggccgacgacgagatgcgccccgatcatgacgcgcttgccgccgcgctcggc
gcggacgcgctcgagccgccggacgcggccgccgcgatcgcgccggcgcccgccgccgcg
ccgcgcgagctcgccgaagacgacatcctcgcgttcccgcgcggcgcggcggcgggcgaa
tgcctgcaccggctgctcgagctgagcaatttcgccgatgcgtcgacgtggccgcccgcc
gcgctgcgcgcgctgcacgagcgcccggtcgaggcggagctcgcgctggccgagcggctg
cccgcgatgatgacgcggctcgtcgccgatctcgcggcgacggagctcgtgccgggcatg
cgcctcgcggcactcgatccggcgcggcggctcacggaaatggagttcctgtttcccgcg
cccgcgctcgatttcaacgcattgcggcgcttgctcgccgcgcacggctatccggacgtc
gcgctcgaagcgggcacgctggccggattcgtcaaaggattcattgacatgatcgtcgag
cacgacggccgcttctggatcgtcgactggaaatcgaatcatctcggcacgacgcccgaa
gcatacggcgagcgggcgctcgacgccgcgatggcgcatcacgcgtatcacctgcaggcg
ctgctctatatggtcgcgctgcatcgctatctgcgcgtgcgcatgcatggctacgactac
gacgcgcacatcgcgggctatctgtacgtgttcgtgcgcggcgtgcgtcccgattggcga
aatggcggcgcgagcgccggcgtgcatgcgcggcggcccgcacgcgcgctgatcgaggcg
ctcgacgcgctgatgcgcgagggggatgcatga
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