Burkholderia pseudomallei K96243: BPSL1885A
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Entry
BPSL1885A CDS
T00203
Name
(GenBank) Hfq protein
KO
K03666
host factor-I protein
Organism
bps
Burkholderia pseudomallei K96243
Pathway
bps02024
Quorum sensing
bps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BPSL1885A
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BPSL1885A
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bps03019
]
BPSL1885A
03036 Chromosome and associated proteins [BR:
bps03036
]
BPSL1885A
Messenger RNA biogenesis [BR:
bps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BPSL1885A
Chromosome and associated proteins [BR:
bps03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BPSL1885A
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
SelB_WH1
EDC3_N
Motif
Other DBs
NCBI-ProteinID:
CAH35885
UniProt:
Q63TT1
LinkDB
All DBs
Position
1:2246186..2246836
Genome browser
AA seq
216 aa
AA seq
DB search
MANPAESHPQNDFINAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKR
AISTIQLDTGGSRPGGRGPRAGGAHGGGGRPGGREGGGHGPYGSHGGSREPRGDGGGYGA
RESRGDGGYGSRESRGDGGYGSRESRGDGGYGSREPRGDGGYGAREPREPREPRESYGAP
QEGASTPSGTQERNGNGNGPVIVTRRRRSLGPTDGQ
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcctgcagaatcccatccgcaaaacgacttcatcaatgccgcgcgcaaggaa
cgcaagcgcgtcgaaatttatctcgtcaacggtattcgactgacgggttgcatcgagtcg
ttcgaccagtatctggtgatgctgcgcacgcccgtcggcctgcaaggcatctataaacgc
gccatctcgacgatccagctcgacacgggcggctcccgtccgggcggacgcggcccgcgc
gcgggcggcgcccacggcggcggcggacgccccggcggacgcgaaggcggcggtcatggc
ccgtacggctcgcacggcggctcgcgcgaaccccgcggcgacggcggcggctatggcgct
cgcgaatcgcgcggcgacggcggttatggctcccgcgaatcgcgcggtgacggcggttat
ggctcccgcgaatcgcgcggcgacggcggctacggttcccgcgaaccgcgtggcgacggc
ggctatggtgcgcgcgagccgcgtgaaccgcgcgagccccgcgagtcttatggcgcgccg
caagaaggcgcatcgacgccgtccggcacgcaggaacgcaacggcaacggcaacggcccg
gtgatcgtcacgcgccgtcgccgttcgctcggcccgaccgacggccaataa
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