Burkholderia pseudomallei K96243: BPSL2279
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Entry
BPSL2279 CDS
T00203
Name
(GenBank) putative single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bps
Burkholderia pseudomallei K96243
Pathway
bps03410
Base excision repair
bps03430
Mismatch repair
bps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BPSL2279
03430 Mismatch repair
BPSL2279
03440 Homologous recombination
BPSL2279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bps03400
]
BPSL2279
DNA repair and recombination proteins [BR:
bps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BPSL2279
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BPSL2279
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BPSL2279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
KfrA_N
Motif
Other DBs
NCBI-ProteinID:
CAH36282
UniProt:
Q63SP1
LinkDB
All DBs
Position
1:2745783..2747477
Genome browser
AA seq
564 aa
AA seq
DB search
MTRIVTRSAVPAALDALARHGLHPVLARLYAARGIASPADVETALSRLVPPAQLKGCAQA
AALLADALEAGRKMLVVADYDCDGATACAVAVRGLRMFGAKIDYLVPNRFEYGYGLTPEI
VELAAARKPDLLITVDNGIASVDGVAAANARGIDVLVTDHHLPGDTLPAARAIVNPNQPG
CAFPSKHIAGVGVMFYVLLALRAELRARGAFGDARPEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRNGRMQPGIAALFRAAARDARSASGFDLGFGLGPRLNAAGRLSDMSL
GIECLTTDDVGRAWELAQQLDAMNRERREIEAGMQQQALADLASVDPAEAATITLFNPEW
HQGVIGIVAGRLKERFHRPAFTFAHADDGGARVKGSGRSIPGFHLRDAIDLISKREPDLI
VTFGGHAMAAGVTLETANVPRFAAAFETVAREWLSDDALARVIETDGDLEDAYFTPQVVE
LLDAAVWGQGFPAPLFSGEFDVASQALVKDKHLKLQLTRGRQRFNAIWFNHAEPLPARAT
LAFRLASDTWNGTTRVQLIVEHAA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcatcgtcacccgctccgccgttcccgccgcgctcgacgcgctcgcccgccac
gggctgcatcccgtgctcgcccgcctctacgcggcgcgcggaatcgcctcgcccgccgac
gtcgaaaccgcgctgtcgcgcctcgtgccgcccgcgcagctcaagggctgcgcgcaggcc
gccgcgctcctcgccgatgcgctcgaggccggccgcaagatgctcgtcgtcgccgattac
gactgcgacggcgcgaccgcctgcgcggttgccgtgcgcggcctgcggatgttcggcgcg
aagatcgattacctcgtgccgaaccgcttcgaatacggctacgggctcacgcccgagatc
gtcgagctcgcggccgcgagaaagcccgacctgctgatcacggtcgacaacggaatcgcg
agcgtcgacggcgtcgcggccgcgaacgcgcgcggcatcgacgtgctcgtcaccgatcac
catctgcccggcgacacgctgcccgccgcgcgcgcgatcgtcaatccgaaccagcccggc
tgcgcgttcccgagcaagcatatcgcgggcgtcggcgtgatgttctacgtgctgctcgcg
ctgcgcgccgagctgcgcgcgcgcggcgcgttcggcgacgcccgccccgagccgcggctc
gacgggctgctcgatctcgtcgcgctcggcacggtggccgacgtcgtgcggctcgacggc
aacaaccgcgtgctcgttgcgcaaggcctgcagcgcatccgcaacggacggatgcagccc
ggcatcgccgcgctctttcgcgcggccgcgcgtgacgcgcgcagcgcatcgggcttcgat
ctcggcttcggcctcggcccgcgcctgaacgcggcgggccgcctgtcggacatgtcgctc
ggcatcgaatgcctgacgaccgacgacgtgggccgcgcgtgggaactcgcgcagcagctc
gacgcgatgaaccgcgagcggcgcgagatcgaggccggcatgcagcagcaggcgctcgcc
gatctcgcgtcggtcgaccccgccgaggcggccaccatcacgctcttcaaccccgaatgg
caccagggcgtgatcgggatcgtcgcggggcggctcaaggagcgctttcaccggccggcg
ttcacgttcgcgcacgcggacgacggcggcgcgcgcgtgaagggctccggccgctcgatt
cccggcttccatctgcgcgatgcgatcgacctgatctcgaagcgcgaacccgatctgatc
gtcacgttcggcggccacgcgatggccgcgggcgtcacgctcgagaccgcgaacgtgccg
cgcttcgcggccgcattcgagacggtcgcgcgcgaatggctgtccgacgacgcgctcgcg
cgggtgatcgagacggacggcgatctcgaggatgcctacttcacgccgcaggtggtcgag
ctgctcgatgcggccgtctggggccagggcttcccggcgccgctcttctcgggcgaattc
gacgtcgcctcgcaggcgctcgtcaaggacaagcacctgaagctgcaattgacgcgcggc
cgccagcgcttcaacgcgatctggttcaaccacgcggagccgctgcccgcgcgcgcgacc
ctcgcgttccggctcgcgagcgatacgtggaacggcacgacgcgcgtgcaactgatcgtc
gagcacgcggcgtag
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integrated database retrieval system
