Burkholderia pseudomallei K96243: BPSS1027
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Entry
BPSS1027 CDS
T00203
Name
(GenBank) putative RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bps
Burkholderia pseudomallei K96243
Pathway
bps02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bps00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BPSS1027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bps03021
]
BPSS1027
Transcription machinery [BR:
bps03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BPSS1027
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
PhyR_sigma-like
HTH_7
HTH_29
GerE
DnaG_DnaB_bind
HTH_40
HTH_24
HTH_20
HTH_11
TnsD
HTH_28
Motif
Other DBs
NCBI-ProteinID:
CAH38488
UniProt:
Q63LI8
LinkDB
All DBs
Position
2:1398855..1399364
Genome browser
AA seq
169 aa
AA seq
DB search
MPANTLRLQREIAALYTGHRGWLHGWLSKKLGCGERAADLVHDTFIRLLARDEPIDAAEP
RAFLTTVAQRVLYNHWRRERLERAYLDALAQWPEAVAPSPETRAVLFETLVEVDRMLDGL
PAVVRRAFLLAQLDGMTHAQIAAELRVSLATVKRYLVKAGAQCYFAIAA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgccggccaacactttgcgtctgcagcgggagatcgctgcgctctataccggtcatcgc
ggctggctacacggctggctgtcgaagaagctcggctgcggcgagcgcgcggccgatctg
gttcacgacacgttcatccgcctgctcgcacgcgacgagccgatcgacgcggccgagccg
cgcgcgttcctgacgaccgtcgcgcagcgcgtgctgtacaaccactggcggcgcgagcgg
ctcgagcgcgcgtatctcgacgcgctcgcgcaatggccggaggcggtcgcgccgtcgccg
gagacacgcgccgtcctgttcgagacgctcgtcgaggtcgaccggatgctcgacgggctg
cccgccgtcgttcgccgcgcgttcctgctcgcgcagctcgacggcatgacgcacgcgcag
atcgcggccgagctgcgcgtgtcgctcgcgaccgtcaagcgctacctggtgaaagcgggc
gcgcagtgctacttcgcgatcgccgcatga
DBGET
integrated database retrieval system
