Burkholderia pseudomallei K96243: BPSS1755
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Entry
BPSS1755 CDS
T00203
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bps
Burkholderia pseudomallei K96243
Pathway
bps02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bps00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BPSS1755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bps03021
]
BPSS1755
Transcription machinery [BR:
bps03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BPSS1755
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF7853
Motif
Other DBs
NCBI-ProteinID:
CAH39230
UniProt:
Q63JG1
LinkDB
All DBs
Position
2:complement(2406884..2408926)
Genome browser
AA seq
680 aa
AA seq
DB search
MTKKLNEVSVDDDANQSDDQPTAASGKGEKAKARDRRAKEKALLKEAFATSTPGTAEELE
ERRTKLRALIKLGKERGFLTYAEINDHLPDNFTETEALEGIIGTFNDMGVAVYEQAPDAE
TLLLNDNAPAASSDDEVEEEAEVALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIEI
AKRIEDGLRHMVMAISACPTTIADILAMAERVANEESRVDELVDGLIDPNAADTDGFSEK
DAEEIENEDAEAEEDDEEEEEDDDGAAQATANAAQLEALKRASLEKFALISEWFDKMRRA
FEKEGYKSKSYLKAQETIQNELMSIRFTARTVERLCDTLRAQVDEVRQVERQILHIVVDK
CGMPRSEFIARFPGSETDLDWAEKVAAEGHSYGAILSRNIPAIREQQQRLLDLQARVVLP
LKDLKETNRQMAAGELKARQAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMK
AVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQET
GLEPDPATLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDTNTVAPADA
ALHASMRDVVKDVLDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQIEAKA
LRKLRHPSRSDKLKSFLEGN
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaagctgaacgaagtatccgtcgatgacgacgcaaaccagagcgacgaccag
cctaccgctgcgtcgggcaaaggcgaaaaggccaaggcgcgcgaccgtcgcgccaaggaa
aaggcgctgctgaaggaagcgttcgcgacgagcacgcccggcacggccgaggagctcgaa
gagcgccgtacgaagctgcgcgcgctgatcaagctcggcaaggagcgcggcttcctcacg
tacgccgaaatcaacgaccatctgccggacaacttcacggaaacggaagcgctcgaaggc
atcatcggcacgttcaacgacatgggcgtcgcggtgtacgagcaggcgcccgacgccgag
acgctgctgttgaacgacaatgcgcccgccgcgtcgtccgacgatgaagtcgaggaggaa
gcggaagtcgcgctgtcgaccgtcgattccgaattcggccgcacgaccgatccggtgcgg
atgtacatgcgcgagatgggcacggtcgagctgctcacgcgcgaaggcgaaatcgagatc
gcgaagcggatcgaggacggcctgcgccacatggtgatggcgatttccgcgtgcccgacg
acgatcgccgacatcctcgcgatggccgagcgcgtggcgaacgaggagagccgcgtcgac
gagctcgtcgacggcctgatcgatccgaacgccgccgataccgacggcttctcggagaag
gacgccgaggaaatcgagaacgaggacgcggaagccgaagaggacgacgaagaggaagaa
gaggacgacgacggcgccgcgcaggcgaccgccaacgcggcccagctcgaagcgctcaag
cgcgcgtcgctcgagaagttcgcgctcatcagcgaatggttcgacaagatgcgccgcgcg
ttcgagaaggaaggctacaagtcgaagtcgtacctgaaggcacaggaaacgatccagaac
gagctgatgtcgatccgcttcaccgcgcgcaccgtcgagcgcctgtgcgatacgctgcgc
gcgcaggtcgacgaagtgcgccaggtcgagcgtcagatcctgcacatcgtcgtcgacaag
tgcgggatgccgcgctcggagttcatcgcgcgcttcccgggcagcgagaccgatctcgac
tgggccgagaaggtcgcggccgaaggccattcgtatggggcgatcctgtcgcgcaacatt
ccggcgatccgcgaacagcagcagcgcctgctcgacctgcaggcgcgcgtcgtgctgccg
ctcaaggacctgaaggaaaccaaccgccagatggcggcgggcgaactgaaggcgcgccag
gcgaagcgcgagatgaccgaggcgaacctgcgcctcgtgatctcgatcgcgaagaagtac
acgaaccgcggcctgcagttcctggacctgattcaggagggcaacatcggcctgatgaag
gcggtggacaagttcgaataccgtcgcggctacaagttctcgacgtatgcgacgtggtgg
atccgccaggccatcacgcgctcgatcgcggaccaggcgcgcacgatccggattccggtt
cacatgatcgagacgatcaacaagatgaaccgcatctcgcggcagatcctgcaggaaacc
ggcctcgagccggatccggcgacgctcgccgagaagatggagatgccggaggacaagatc
cgcaagatcatgaagatcgcgaaggagccgatctcgatggaaacgccgatcggcgacgac
gacgattcccatctcggcgacttcatcgaggacaccaacacggtcgcgccggcggatgcc
gcgctgcatgcgagcatgcgcgacgtcgtgaaggacgtgctcgattcgctgacgccgcgc
gaggcgaaggtgctgcggatgcgcttcggcatcgagatgagcaccgatcacacgctcgag
gaagtcggcaagcagttcgacgtcacgcgcgagcggattcgtcagatcgaggcgaaggcg
ctgcgcaagctgcgtcatccgagccgttcggacaagctgaagtcgttcctcgaggggaac
tga
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