Burkholderia pseudomallei NAU35A-3: BBU_1048
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Entry
BBU_1048 CDS
T03476
Name
(GenBank) ribonuclease, Rne/Rng family domain protein
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
bpsa
Burkholderia pseudomallei NAU35A-3
Brite
KEGG Orthology (KO) [BR:
bpsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpsa03019
]
BBU_1048
03009 Ribosome biogenesis [BR:
bpsa03009
]
BBU_1048
Messenger RNA biogenesis [BR:
bpsa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BBU_1048
Ribosome biogenesis [BR:
bpsa03009
]
Prokaryotic type
rRNA processing factors
BBU_1048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
TetR_C_5-like
Motif
Other DBs
NCBI-ProteinID:
AIS86275
LinkDB
All DBs
Position
1:1267600..1269066
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AA seq
488 aa
AA seq
DB search
MNEEILINITPQETRVALVQQGAVQELHVERTLSRGRVGNVYLGKVVRVLPGMQSAFIDI
GLERAAFLHVADIWQPRAGDAPAAATHQPIEKIVFEGQTLMVQVIKDPIGTKGARLSTQI
SIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVIPSDEKGGYIVRTIAEDATSDE
LAADVAYLRKTWATIVAQGQRVPPTSLLYQDLDLAQRVLRDFANDDTTRIQVDSRETHQR
LVEFAAEFTPAVSPKLHHYTGERPLFDLYNIEAEIQRALSRRVDLKSGGYLMIDQTEAMT
TIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAVL
AELKKALSRDRTRVTVNTFSQLGLVEMTRKRTRESLAHVLCEPCPTCQGKGQVKTSRTVC
YDILREILRESRQFNPREFRVIASQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNLSQ
EQYDIVLM
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagagatcctgatcaacatcacgccgcaggaaacgcgggtcgcgctcgtccaa
caaggcgcggtgcaggagctccacgtcgagcgcacgctgtcgcgcggacgcgtcggcaac
gtctatctcggcaaggtcgtgcgcgtgctgcccggcatgcagtcggcgttcatcgacatc
gggctcgagcgcgcggcgttcctgcacgtcgccgacatctggcagccgcgcgcgggcgac
gcgcccgccgccgcgacgcaccagccgatcgagaaaatcgtgttcgagggccagacgctg
atggtccaggtgatcaaggacccgatcggcacgaagggcgcgcggctgtcgacgcagatc
agcatcgcggggcgcacgctcgtctacctgccgcaggagccgcacatcggcatctcgcag
aagatcgagagcgaggccgagcgcgaggcggtgcgtgcgcggctgaccgcggtgatcccg
tccgacgagaaaggcggctacatcgtgcgcacgatcgccgaggacgcgacctccgacgag
ctcgccgccgacgtcgcgtacctgcgcaagacgtgggcgacgatcgtcgcgcagggccag
cgcgtgccgccgacgagcctgctgtatcaggatctcgatctcgcgcagcgcgtgctgcgc
gatttcgcgaacgacgacacgacgcgcatccaggtcgattcgcgcgagacacaccagcgg
ctcgtcgagttcgcggccgagttcacgccggccgtcagcccgaagctgcaccactacacc
ggcgagcggccgctgttcgatctgtacaacatcgaagccgaaatccagcgcgcgctgtcg
cgtcgcgtcgatctgaaatcgggcggctacctgatgatcgatcagaccgaggcgatgacg
acgatcgacgtgaacacgggcggctacgtcggcgcgcgcaatttcgacgatacgatcttc
aagacgaatctcgaggcggcgcacacgatcgcgcggcagcttcggctgcgcaatctcggc
gggatcatcatcatcgatttcatcgacatggagaacgccgagcatcgcgacgcggtgctc
gccgagctgaagaaggcgctctcgcgcgaccgcacccgcgtgacggtgaacaccttctcg
cagctggggctcgtcgagatgacgcgcaagcgcacgcgcgaatcgctcgcgcacgtgctg
tgcgagccttgcccgacgtgccagggcaagggccaggtgaagacatcgcgcaccgtgtgc
tacgacatcctgcgcgagatcctgcgcgagtcgcgacaattcaatccgcgcgagtttcgc
gtgatcgcgtcgcagcaggtgatcgacctctttctcgacgaggagtcgcagcatctcgcg
atgctgatcgacttcatcggcaagccggtgtcgttgcaggtcgagtcgaacctgagccag
gagcagtacgacatcgtcttgatgtga
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