Burkholderia pseudomallei NAU35A-3: BBU_1301
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Entry
BBU_1301 CDS
T03476
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
bpsa
Burkholderia pseudomallei NAU35A-3
Pathway
bpsa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BBU_1301 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpsa03400
]
BBU_1301 (xseA)
Enzymes [BR:
bpsa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BBU_1301 (xseA)
DNA repair and recombination proteins [BR:
bpsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BBU_1301 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DHQ_synthase
Motif
Other DBs
NCBI-ProteinID:
AIS86642
LinkDB
All DBs
Position
1:complement(1569866..1571248)
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AA seq
460 aa
AA seq
DB search
MHSESPFAGSGGAPAGDGVIPVSALNRAIGTMLERTFPLLWVAGEVSNFTRAASGHWYFS
IKDQQAQMRCVMFRGRAQHAEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRL
YEAFLRLKAQLEAEGLFAPERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVI
VYPAPVQGAGAAEKLAAMVATANARREVDVLIVCRGGGSIEDLWSFNDEALARAIAASDV
PVVCGVGHETDFTIADFAADVRAPTPTGAAELVSPQRALLLRELGERQGALARGLRRGLD
ARAQQLDWLARRLISPAERLQRQAMHVGQLAARLAAAGARPVRDARARFSLVQLRWQRAR
PDFAQARQVLAAFAQRLDATLQRRLERDTARVAACAARLEVLSPQRTLERGYAALIDAQT
GRAVRAPASLKPQRRLTVHLAEGSADVSLADVQPRLSDTF
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcattccgaatctccctttgccggctccggcggcgcgcccgcgggcgacggcgtcatt
cccgtgtccgcgctcaaccgcgcgatcggcacgatgctcgagcgcacgttcccgctgctg
tgggtggcgggcgaagtgtcgaacttcacgcgcgcggcgagcggccactggtatttctcg
atcaaggatcagcaggcgcagatgcgctgcgtgatgttccgcggccgcgcgcagcacgcg
gagttcacgccgcgcgaaggcgacaggatcgaggtgcgcgcgctcgtcacgatgtacgag
ccgcgcggcgaagtgcaactgagcgtcgaggcgatccggcgcaccgggcaggggcggctt
tacgaagcgttcctgcggctgaaggcgcagctcgaagccgaagggctcttcgcgcccgag
cgcaagcgggcgccgccgacgcatccgcgcgcgatcggcatcgtcacgtcgctgcaggcg
gccgcgctgcgcgacgtgctgacgacgctcgcgcgccgcgcgccgcacgtgccggtgatc
gtctatccggcgcccgtgcagggcgcgggcgcggcggagaagctcgccgcgatggtcgcg
acggcgaacgcgcggcgcgaggtcgacgtgctgatcgtctgccgcggcggcggctcgatc
gaggacttgtggtcgttcaatgacgaggcgctcgcgcgcgcgatcgcggcgagcgacgtg
ccggtcgtctgcggcgtcggccacgagaccgatttcacgatcgccgatttcgcggccgac
gtgcgcgcgccgacgccgaccggcgcggcggagctcgtgagcccgcagcgcgcgctgctg
ctgcgcgagctcggcgagcggcagggcgcgctcgcgcgcggcctgcggcgtgggctcgac
gcgcgcgcgcagcagctcgactggctcgcgcgccggctgatcagcccggccgagcgcctg
cagcgccaggcgatgcacgtggggcagctcgccgcgcggcttgccgcggcgggcgcgcgg
cccgtgcgcgacgcgcgcgcgcgtttttcgctcgtgcaattgcgctggcagcgcgcgcgg
cccgacttcgcgcaggcacggcaggtgctcgccgcgttcgcgcaaaggctcgatgcgacg
ctgcagcggcgcctcgaacgcgataccgcacgcgtggccgcgtgcgcggctcggctcgag
gtgctgagcccgcaacgcacgctggagcgcggctacgcggcgctcatcgacgcgcagacg
ggccgcgcggtgcgcgcgcccgcatcgctcaagccgcagcgccggctgaccgtgcacctt
gccgagggctcggccgacgtatcgcttgccgacgtgcaaccgcgtctttcggatacattc
tga
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