Burkholderia pseudomallei NAU35A-3: BBU_2805
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Entry
BBU_2805 CDS
T03476
Name
(GenBank) beta-eliminating lyase family protein
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bpsa
Burkholderia pseudomallei NAU35A-3
Pathway
bpsa00260
Glycine, serine and threonine metabolism
bpsa00460
Cyanoamino acid metabolism
bpsa00630
Glyoxylate and dicarboxylate metabolism
bpsa00670
One carbon pool by folate
bpsa00680
Methane metabolism
bpsa01100
Metabolic pathways
bpsa01110
Biosynthesis of secondary metabolites
bpsa01120
Microbial metabolism in diverse environments
bpsa01200
Carbon metabolism
bpsa01230
Biosynthesis of amino acids
bpsa01240
Biosynthesis of cofactors
bpsa04981
Folate transport and metabolism
Module
bpsa_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bpsa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BBU_2805
09102 Energy metabolism
00680 Methane metabolism
BBU_2805
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BBU_2805
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BBU_2805
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BBU_2805
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BBU_2805
Enzymes [BR:
bpsa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BBU_2805
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AIS86473
LinkDB
All DBs
Position
1:3261441..3262688
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AA seq
415 aa
AA seq
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MFDRAQSTIANVDPEIWQAIQQENVRQEEHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDIVEQLAIDRVKALFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNEAEDIDYEAAEQLAHEHKPKLIVAGASAFAL
KIDFERLAKIAKAVGAYLMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEYEKQINSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFKEYQQKVVENARVLAQTL
VKRGLRIVSGRTESHVMLVDLRAKNITGKAAEAALGNAHITVNKNAIPNDPEKPFVTSGV
RLGSPAMTTRGFGPQEAELVGNLIADVLEHPEDAATIERVRAQVAELTKRFPVYR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagagcccaaagcaccattgcgaacgtcgatcccgagatctggcaagcgatt
cagcaggaaaacgtccgtcaggaagagcacatcgagctgatcgcgtcggagaattacacg
agcccggccgtgatggcggcgcaaggctcgcaactgacgaacaagtacgcggaaggctat
ccgggcaagcgctattacggcggctgcgaatacgtggacatcgtcgagcagctcgcgatc
gatcgcgtgaaggcgctgttcggcgccgaagcggcgaacgtgcagccgaactcgggctcg
caggcgaaccagggcgtgttcttcgcgatgctcaagccgggcgacacgatcatgggcatg
agcctcgcgcacggcggccacctcacgcacggctcgccggtgaacatgtcgggcaagtgg
ttcaacgtcgtgagctacgggctgaacgaggctgaagacatcgattacgaagcggccgag
cagctcgcgcacgagcacaagccgaagctgatcgtcgcgggcgcgtcggcgttcgcgctg
aagatcgatttcgagcgcctcgcgaagatcgccaaggcagtgggcgcgtacctgatggtc
gacatggcgcactacgcgggcctgatcgcggcgggtgtctatccgaacccggtgccgcat
gcggatttcgtcacgacgacgacgcacaagagcctgcgcggcccgcgcggcggcgtgatc
ctgatgaaggccgagtacgagaagcagatcaactcggcgatcttcccgggcatccagggc
ggaccgctgatgcacgtgatcgccgcgaaggccgtcgcgttcaaggaagcgctgtcgccg
gaattcaaggaataccagcagaaggtggtcgagaacgcccgcgtgctggcgcaaacgctc
gtcaagcgcggcctgcgcatcgtgtcgggccgcaccgagagccatgtgatgctggtcgac
ctgcgcgcgaagaacatcacgggcaaggcggcggaagcggcgcttggcaatgcgcacatc
acggtcaacaagaacgcgatcccgaacgatccggagaagcccttcgtaacgagcggcgtg
cgcctgggctcgccggcgatgacgacgcgcggcttcggcccgcaggaagcggagctcgtc
ggcaacctgatcgccgacgtgctcgagcatcccgaagacgcggcgacgatcgagcgcgtg
cgtgcgcaggtcgccgagctgacgaagcgtttcccggtctatcgctga
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