Burkholderia pseudomallei NAU35A-3: BBU_2878
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Entry
BBU_2878 CDS
T03476
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
bpsa
Burkholderia pseudomallei NAU35A-3
Pathway
bpsa00521
Streptomycin biosynthesis
bpsa00523
Polyketide sugar unit biosynthesis
bpsa00525
Acarbose and validamycin biosynthesis
bpsa00541
Biosynthesis of various nucleotide sugars
bpsa01100
Metabolic pathways
bpsa01110
Biosynthesis of secondary metabolites
bpsa01250
Biosynthesis of nucleotide sugars
Module
bpsa_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
bpsa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BBU_2878 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BBU_2878 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
BBU_2878 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BBU_2878 (rfbB)
00525 Acarbose and validamycin biosynthesis
BBU_2878 (rfbB)
Enzymes [BR:
bpsa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
BBU_2878 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
AIS86612
LinkDB
All DBs
Position
1:3345276..3346337
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AA seq
353 aa
AA seq
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MILVTGGAGFIGANFVLDWLAQSDEAVLNVDKLTYAGNLGTLKSLQGNPKHVFARVDICD
RAAIDALLAQHKPRAIVHFAAESHVDRSIHGPADFVQTNVVGTFTLLEAARQYWSALGPD
AKAAFRFLHVSTDEVFGSLSPADPQFSETTPYAPNSPYSATKAGSDHLVRAYHHTYGLPV
LTTNCSNNYGPYQFPEKLIPLMIANALGGKPLPVYGDGQNVRDWLYVGDHCSAIREVLAR
GVPGETYNVGGWNEKKNLDVVHTLCDLLDEARPKAGGSYRDQITYVTDRPGHDRRYAIDA
RKLERELGWKPAETFETGLAKTVRWYLDHQEWVDEVVSGDYRKWVETNYAQRA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgatcttggtaacgggcggcgccggtttcatcggcgccaacttcgtgcttgactggctg
gctcaatccgacgaggcggtgctgaacgtcgataagctgacgtacgcgggcaacctcggc
acgttgaagtcgttgcaggggaatccgaagcatgtgttcgcccgcgtcgacatctgcgat
cgcgccgcaatcgacgcgctgctggcgcagcacaagccgcgcgcgatcgtgcacttcgcg
gccgagagccacgtcgaccgttcgattcacggtccggccgatttcgtgcagacgaacgtc
gtcggcaccttcacgctgctcgaagccgcgcgccaatactggagcgcgctcggccccgac
gcgaaggcggcgttccgcttcctgcacgtatcgacggacgaagtgttcggctcgctgtcg
ccggccgatccgcagttctccgaaaccacgccgtacgcgccgaacagcccgtactcggcg
acgaaggcgggctccgaccacctcgtacgcgcgtatcaccacacgtacgggttgccggtg
ctcacgacgaactgctcgaacaactacggcccgtatcagttccccgagaagctgattccg
ctgatgatcgcgaacgcgctcggcggcaagccgctgcccgtctacggcgacggccagaac
gtgcgggactggctgtacgtcggcgatcactgcagcgcgattcgcgaggtgctcgcgcgc
ggcgtgccgggcgagacgtacaacgtcggcggctggaacgaaaagaagaatctcgatgtc
gtgcacacgctgtgcgatctgctcgacgaggcccggccgaaggcgggcggctcgtaccgc
gatcagatcacgtacgtgaccgatcgccccggccacgatcgccgctatgcgatcgatgcg
cgcaagctcgagcgcgagctcggctggaagccggccgagacgttcgagaccggacttgcg
aagaccgtgcgctggtatctcgaccatcaggagtgggtcgacgaagtggtgtcgggcgat
taccgcaagtgggtcgaaacgaactacgcgcaacgcgcgtaa
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