Burkholderia pseudomallei NAU35A-3: BBU_4245
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Entry
BBU_4245 CDS
T03476
Symbol
polA
Name
(GenBank) DNA polymerase I family protein
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bpsa
Burkholderia pseudomallei NAU35A-3
Pathway
bpsa03030
DNA replication
bpsa03410
Base excision repair
bpsa03420
Nucleotide excision repair
bpsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBU_4245 (polA)
03410 Base excision repair
BBU_4245 (polA)
03420 Nucleotide excision repair
BBU_4245 (polA)
03440 Homologous recombination
BBU_4245 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpsa03032
]
BBU_4245 (polA)
03400 DNA repair and recombination proteins [BR:
bpsa03400
]
BBU_4245 (polA)
Enzymes [BR:
bpsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBU_4245 (polA)
DNA replication proteins [BR:
bpsa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BBU_4245 (polA)
DNA repair and recombination proteins [BR:
bpsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BBU_4245 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBU_4245 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AIS91961
LinkDB
All DBs
Position
2:1017104..1019875
Genome browser
AA seq
923 aa
AA seq
DB search
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIVNMLRRMRKDVSAEY
SACVFDAKGKTFRDDLYADYKAHRPPMPPDLALQIEPIHTAVRALGWPLLMIEGVEADDV
IGTLAKQAEQHGMNVIVSTGDKDLAQLVTDRVTLINTMTNEALDRDGVLAKFGVPPERIV
DYLSLIGDTVDNVPGVEKCGPKTAVKWLTQYGSLDGVVEHAGEIKGVVGDNLRRALDFLP
LARKLVTVETGCELAPHVESFDASLATDGEGRDALREIFAKYGFKTWLRELDSEPAAAAG
AAAAGAAPDPASGATAELPLATARNYATVQTWEQFDAWLAKISAAELTAFDTETTSLDPM
RAQIVGLSFSVEPGHAAYVPVAHRGPDMPAQLPRDEVLAKLTPWLEDAGKKKLGQHLKYD
AQVLANYGIALNGIEHDTLLESYVLESHRTHDMDSLALRHLGVKTIKYEDVAGKGAQQIG
FDEVPLAQASEYAAEDADITLQLHHALYPQIAREPGLTRVYRDIELPVSLVLRKMERTGV
LIDGDRLSRQSGEIATRLVALEQEAYALAGGEFNLGSPKQIGQIFFERLQLPVVKKTPSG
APSTDEEVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNPDTGRVHTNYAQAVAV
TGRLASNDPNLQNIPVRTAEGRRIREAFVAPPGSKIVSADYSQIELRIMAHISEDESLLR
AFAHGEDIHRATAAEVFGVTPLEVTSDQRRIAKVINFGLIYGMSSFGLASNLGITRDAAK
LYIDRYFLRYPGVARYMEETRMRAKEKGYVETVFGRRLWLPEINGGNGPRRQAAERAAIN
APMQGTAADLIKLSMIAVEDWLERGGLRARMIMQVHDELVLEVPEDELSIVREKLPEMMC
GVAKLKVPLVAEVGVGENWEEAH
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaaatctggaaggtaagaccctgctattggttgacggttcgagctat
ctgtatcgggcttaccatgcgatgcctgatttgcgcggccctggcggggagccgaccgga
gcgctctacggaatcgtcaatatgttgcgccgcatgcgcaaggatgtcagtgcagagtat
agcgcgtgcgtgttcgacgccaagggcaaaaccttccgcgacgatctgtatgccgactac
aaggcgcaccgcccgccgatgccgcccgatctcgcgctgcagatcgagccgatccatacg
gccgtgcgcgcgctcggctggccgctgttgatgatcgagggcgtcgaggccgacgacgtg
atcggcacgcttgcgaagcaggccgaacaacacggcatgaacgtgatcgtctcgacgggc
gacaaggacctcgcgcagctcgtcaccgatcgcgtcacgctcatcaacacgatgacgaac
gaggcgctcgaccgcgacggcgtgctcgcgaagttcggcgtgccgccggagcggatcgtc
gattacctgtcgctcatcggcgacaccgtcgacaacgtgccgggcgtcgagaagtgcggg
ccgaagacggccgtcaagtggctcacgcagtacggctcgctcgacggcgtcgtcgaacat
gcgggcgagatcaagggcgtcgtcggcgacaacctgcgccgtgcgctcgatttcctgccg
ctcgcgcgcaagctggtgacggtcgagaccggctgcgagctcgcgccgcacgtcgaatcg
ttcgacgcgtcgctcgcgacggacggcgagggccgcgacgcgctgcgcgagatcttcgcg
aagtacggcttcaagacgtggctgcgcgagctcgacagcgaacccgccgccgcggccggt
gcggccgccgccggcgccgcgccggatccggcgagcggcgcgacggccgaactgccgctc
gccacggcgcgcaactacgcgaccgtgcagacgtgggagcagttcgacgcgtggctcgcg
aagatctccgccgcagagctgaccgcgttcgacaccgagacgacgtcgctcgacccgatg
cgcgcacagatcgtcggcctgtcgttctcggtggagccgggccatgccgcgtacgtgccg
gttgcgcaccgcgggccggacatgcccgcgcaactgccgcgcgacgaagtgctcgcgaag
ctcacgccgtggctcgaggatgcgggcaagaagaagctcggccaacacctgaagtacgac
gcgcaggtgctcgcgaactacggcatcgcgctgaacggcatcgagcacgacacgctgctc
gaatcgtatgtgctcgaatcgcaccgcacgcacgacatggacagcctcgcgctgcgccat
ctcggcgtgaagacgatcaagtacgaggacgtggcgggcaagggcgcgcagcagatcggc
ttcgacgaggtgccgctcgcgcaggcgtccgagtatgcggcggaagacgccgacatcacg
ctgcagctgcatcacgcgctgtatccgcagatcgcgcgcgagccgggcctcacgcgcgtg
tatcgcgacatcgagctgccggtgtcgctcgtgttgcgcaagatggagcgcaccggcgtg
ctgatcgacggcgacaggctgagccgccagagcggcgagatcgcgacgcggctcgtcgcg
ctcgagcaggaggcgtacgcgctcgcgggcggcgaattcaatctcggctcgccgaagcag
atcggccagattttcttcgagcggctgcaattgcccgtcgtcaagaagacgccgagcggc
gcgccgtcgaccgacgaggaggtgctgcaaaagctcgccgaggactatccgctgccgaag
ctgttgcttgagcaccgcggcctgtcgaagctgaaatcgacctataccgacaagctgccg
cgcatggtcaatccggacacgggccgcgtgcacacgaactatgcgcaggcggtggcggtc
accgggcggctcgcgtcgaacgatccgaacctgcagaacatcccggtgcgcacggccgaa
gggcggcgcatccgcgaggcgttcgtcgcgccgccgggcagcaagatcgtgtccgccgac
tattcgcaaatcgagctgcgcatcatggcgcacatctcggaggacgaatcgttgctgcgc
gcgttcgcgcacggcgaggacattcaccgcgcgaccgcggcggaggtgttcggcgtgacg
ccgctcgaagtgacgtccgatcagcggcgcatcgcgaaggtgatcaacttcggtctgatc
tacgggatgagttcgttcggcctcgcgtcgaatctcggcatcacgcgcgatgcggcgaag
ctctatatcgaccgctacttcctccgctatccgggcgtcgcccgctacatggaggaaacg
cgcatgcgggcgaaggagaagggctacgtcgaaaccgtgttcggccgccgcctgtggctg
cccgagatcaacggcggcaacgggccgcgccgccaggccgccgagcgcgcggcgatcaac
gcgccgatgcagggcacggccgccgatctgatcaagctgtcgatgatcgcggtcgaggac
tggctcgagcgcggcggcttgcgcgcgcgaatgatcatgcaggtgcacgacgaactcgtg
ctcgaggtgccggaggacgagctgtccatcgtgcgcgagaagctgccggagatgatgtgc
ggcgtcgcgaaactgaaggtgccgctcgtcgccgaggtcggcgtcggcgagaactgggaa
gaggcgcactga
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