Burkholderia pseudomallei NAU35A-3: BBU_685
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Entry
BBU_685 CDS
T03476
Name
(GenBank) uvrD/REP helicase N-terminal domain protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bpsa
Burkholderia pseudomallei NAU35A-3
Pathway
bpsa03420
Nucleotide excision repair
bpsa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBU_685
03430 Mismatch repair
BBU_685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpsa03400
]
BBU_685
Enzymes [BR:
bpsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBU_685
DNA repair and recombination proteins [BR:
bpsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBU_685
MMR (mismatch excision repair)
Other MMR factors
BBU_685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AIS87977
LinkDB
All DBs
Position
1:complement(829571..831934)
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AA seq
787 aa
AA seq
DB search
MPDLLANLNPEQLAAVTLPNEPALILAGAGSGKTRVLITRIAWLIRQGYAAPATVLAVTF
TNKAAREMMARLSAMMPIDTRGMWIGTFHGLCNRMLRAHYRDAGLPQTFQILDTADQLSA
IKRLMKAANVDDEKYPPKNVQYFINNAKEQGLRPEKVDATDSFNRKFVELYQAYEQQCQR
EGVVDFPELLLRCYELLAHNPPLRAHYQARFKHILVDEFQDTNKLQYAWLKLLAGGHNAI
FAVGDDDQSIYAFRGANVGNMRDFEHEFRVRNLIKLEQNYRSHGNILDAANHLIANNAHR
LGKNLRTDAGHGEPVRVYEAATDAQEAAWIVEEIRSLVNAGLARSEVAVLYRSNAQSRSI
EHTLMTAGIAYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSI
EQLADAARLYDCSMAAAIPYVAGKAGSSLASFANLIAKMRAETARMSLPETVEHVVRASG
LADFYQGEREGQDRLENLQELVNAATAFVSEEGYGLDTPARSIPLHARASAAPELTAGGA
DPADAVLAPANLADPAQNPDAMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLE
FTAVFITGLEEGLFPHENSALESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NIRSRFFDELPQHVLKWLTPKVEAGARWGGRSDNAGWGRDWFARPGGGARQGVVDAAVSA
PLPAFANQQREAQNGLRIGQQVFHTKFGEGTVTALEGSGTDAKAQVKFKRHGEKWLALAV
AKLQAVE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgctcgcgaacctgaaccccgaacaactcgccgccgtcacgttgccgaac
gagccggcgctgatcctcgccggggcgggcagcggcaagacccgcgtgctcatcacgcgg
atcgcgtggctgatccggcaaggctatgcggcgcccgccaccgtgctcgccgtcacgttc
acgaacaaggccgcgcgcgagatgatggcgcgcctgtccgcgatgatgccgatcgacacg
cgcggcatgtggatcggcacgttccacggcctgtgcaaccggatgctgcgcgcgcactac
cgcgacgcggggctgccgcagacgttccagatcctcgataccgccgaccagctctccgcg
atcaagcggctgatgaaggcggcgaacgtcgacgacgagaagtacccgccgaagaacgtc
cagtacttcatcaacaacgcgaaggagcaggggctgcgccccgagaaggtcgacgcgacc
gacagcttcaaccgcaagttcgtcgagctgtaccaggcgtacgagcagcagtgccagcgc
gagggcgtcgtcgatttccccgagctgctgttgcgctgctacgagttgctcgcgcacaac
ccgccgctgcgcgcgcactaccaggcgcgcttcaagcacatcctcgtcgacgagttccag
gatacgaacaagctgcagtacgcgtggctcaagctcctcgcgggcggccacaacgcgatc
ttcgcggtcggcgacgacgaccagtcgatctatgcgtttcgcggcgcgaacgtcggcaac
atgcgcgatttcgagcacgaattccgcgtgcgcaacctgatcaagctcgagcagaactac
cgctcgcacggcaacatcctcgacgcggcgaaccacctgatcgcgaacaacgcgcaccgg
ctcggcaagaacctgcgcaccgacgcgggccacggcgagcccgtgcgcgtgtacgaagcg
gccaccgacgcgcaggaagcggcgtggatcgtcgaggagatccgctcgctcgtgaacgcg
gggctcgcgcgcagcgaggtggcggtgctgtaccggagcaacgcgcagtcgcgctcgatc
gagcacacgctgatgacggcgggcatcgcgtaccgcgtgtacggcggcctgcgcttcttc
gagcgccaggaggtgaagcacgcgctcgcgtatctgcgcctcatcgacaatccgaacgac
gacaccgcgttcgcgcgcgtcgtcaactttccgacgcgcggcatcggcgcgcgctcgatc
gagcagctcgccgacgcggcgcgcctgtacgactgctcgatggcggccgcgattccgtac
gtggcgggcaaggcgggctcgagcctggcgtcgttcgcgaacctgatcgcgaagatgcgc
gcggagaccgcgcggatgagcctgcccgagacggtcgagcacgtcgtgcgcgcgagcggc
ctcgccgatttctaccagggcgagcgcgaagggcaggatcgcctcgagaacctgcaggaa
ctggtgaacgcggccaccgcgttcgtctccgaggagggctacgggctcgacacgcccgcg
cgctcgattccgctgcatgcgcgcgcgagcgcggcgccggagctcaccgcgggcggcgcc
gatccggccgacgcggtgctcgcgcccgcgaacctcgccgatcccgcgcagaacccggac
gcgatgacgccgctcgccggcttcctgtcgcacgcgtcgctggaggcgggcgacaaccag
gcgcaggcgggccaggacgcggtgcaactgatgacggtccacgcggcgaaggggctcgag
ttcaccgcggtgttcatcaccgggctcgaggaagggctcttcccgcacgagaacagtgcg
ctcgaatccgacggcctcgaagaggaacgccggctgatgtacgtcgcgatcacgcgcgcc
aaggagcggctctacctgtcgttcgcgcagagccggatgctgcacggccagacccgctac
aacatccgctcgcgctttttcgacgagctgccgcagcacgtgctcaagtggctcacgccg
aaggtcgaggcgggcgcccgctggggcggccgctcggacaacgccggctggggccgcgac
tggttcgcgcggccgggcggcggcgcgcggcagggcgtggtcgacgcggcggtgtccgcg
ccgctgcccgcgttcgcgaaccagcagcgcgaggcgcagaacggcttgcggatcggccag
caggtgttccacacgaagttcggcgaaggcacggtgacggcgctcgaaggcagcggcacc
gacgcgaaggcgcaagtcaaattcaagcggcacggcgagaagtggctcgcgctcgcggtc
gcgaaactgcaggcggtcgaatga
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