Burkholderia pseudomallei NAU35A-3: BBU_914
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Entry
BBU_914 CDS
T03476
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bpsa
Burkholderia pseudomallei NAU35A-3
Pathway
bpsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BBU_914 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpsa03400
]
BBU_914 (recD)
Enzymes [BR:
bpsa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BBU_914 (recD)
DNA repair and recombination proteins [BR:
bpsa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BBU_914 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
NAT10_TcmA_helicase
SLFN-g3_helicase
DEAD
MukB
Motif
Other DBs
NCBI-ProteinID:
AIS89177
LinkDB
All DBs
Position
1:complement(1109905..1112478)
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AA seq
857 aa
AA seq
DB search
MSARAPRPRAGRHARRSPRAASTAAGHVCVALRALAQRYDEPYDDVRAALAASGVTAFDG
IVRGGECPLVVDRDGRLYLARYFEYETRLANALVERSRCGGAPAGGADALSPDALGERLV
RYFGPQKERGVDWQRVAALIALTGRVTIVSGGPGTGKTTTVVGVIACLLDAHPELRIALA
APTGKAAQRMQEALHARAGSLPAELAARLPRTSCTLHRLLGGGPGGRFAHHRDNPLPYDL
VVVDEASMIDVALAAHLLDALAPNARLVLLGDKDQLAAVEAGAVFAELSARPAFSPATCA
TIARTLGVGEAEFVAALPDGFVVQAGGAERVADARAAAADMDAAARGTAGAAAAAARTTA
AAAARMTMAAAAATGAAPESAAQRAPAPHAGRRGGGRASNRTVDDAQGSLFAFDDDAFGV
GTSGGEPGAGAQGAGRRDGGAPSLDGPHAGHRDGGASPGVAHSRRDAFDARARSDSADVS
DLENAARAYAPAGAAGPADSPADASFVEPAAWIEVDELAWLDNAVFSFSEGASANAEADG
RRSAAATATDAGARTAPPVAREATAPTPRETARSDGSAVAPLTDCVVWLERNYRFGLDSP
IGRLSLAIRRGAVQDALDALSTQDDAAARFSDDGGATLSAATVEQLARGFAGYAAALRDA
LATPEPDALPLFDVLNRFRVLCATRTGARGAEEVNARMAAEVRRAVRVPLALGAHWFAGR
PVMVTRNDYALGLFNGDIGIALPGARGALRVWFRGADGRARAVSPAALPPHDTAFALTVH
KSQGSEFDDAALILPASFNRVLSRELVYTAITRARARVQVIGSRAVLALAIATRTARDSG
LAARIADALRARQEGAR
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggcgcgagcgccgcggccgcgcgctgggcggcacgcgcggcgttcgccgcgagcc
gcgtcgacggcggcggggcacgtatgcgtcgcgctgcgcgcgctcgcgcagcgctacgac
gagccgtacgacgacgtacgcgcggcgctcgccgcgagcggcgtgaccgcgttcgacggc
atcgtgcgcggcggcgagtgcccactcgtcgtcgatcgcgatggtcggctgtatctcgcg
cgctacttcgaatacgagacgcggctcgcgaacgcgctcgtcgagcggagccgatgcggc
ggcgcgccggcgggcggcgccgatgcgctctcgcccgacgcgctcggcgagcggctcgtc
cgctatttcgggccgcagaaggagcggggcgtcgattggcagcgcgttgcggcgctcatc
gcgctcacgggccgcgtgacgatcgtgagcggcgggccgggcaccggcaagacgacgacg
gtcgtcggcgtgatcgcgtgcctgctcgatgcgcatccggagttgcggatcgcgcttgcc
gcgcccaccggcaaggccgcgcagcggatgcaggaggcgctgcacgcgcgcgccggcagc
ctgccggcggaactcgcggcgcgcctgccgcgcacgtcctgcacgctgcaccggctgctg
ggcggtggcccgggcgggcgcttcgcgcaccaccgcgacaatccgctgccgtacgatctc
gtcgtcgtcgacgaggcttcgatgatcgacgtcgcgctcgccgcgcatttgctcgacgcg
ctcgcgccgaacgcgcgcctcgtgctgctcggcgacaaggatcagctcgcggccgtcgag
gcgggcgcggtgttcgccgagctgagcgcgcgtcccgcgttcagcccggcgacgtgcgcg
acgatcgcgcgcacgctcggcgtcggcgaggccgagttcgtggcggcgctgccggacggg
ttcgtcgtgcaggcgggcggcgcggagcgcgtggcggacgcgcgtgcggcggcggccgat
atggacgcggccgcgcgcgggacggccggcgccgcggctgcggccgcacgaacgaccgcg
gccgcagccgcacgaatgaccatggccgcagccgcggcgacgggggccgcgccggaatcc
gccgcgcaacgcgcgccggcgccgcacgcgggccggcgcggcggcgggcgcgcatcgaat
cggaccgtcgacgatgcgcagggatcgttgttcgcgttcgacgacgacgcattcggtgtg
ggcacgtcgggcggcgagccgggggccggcgcgcaaggtgccgggaggcgagatggcggg
gcgccgagcctcgacgggccgcacgccgggcatcgggacggcggcgcatcgcccggcgtc
gcgcacagccggcgcgatgcgttcgacgcgcgtgcccggtcggattcggcggatgtttcc
gacctggaaaacgccgcgcgcgcgtacgcgccggcgggcgcagccggcccggccgattcg
ccggcggacgcgtctttcgtcgagccggccgcctggatcgaagtggacgaactcgcgtgg
ctcgacaacgcggtcttttcgttctccgaaggcgcttcggcgaatgccgaagccgacggg
cggcgaagcgccgcggcgacggcgaccgacgcgggcgcgcgcaccgcgccgccggttgcg
cgggaagcgacggcgccgacgccgcgcgagaccgcgcgatcggacggttccgccgtcgcg
ccgctgaccgactgcgtcgtctggcttgaacgcaactatcgcttcggccttgattcgccg
atcggccggctgtcgcttgcgattcgccgcggcgcggtgcaggacgcgctcgacgcgcta
tcgacgcaagacgacgcggccgcgcgttttagcgacgacggcggcgcgacgctgtcggcc
gcgacggtcgagcagctcgcgcgaggcttcgccggctatgcggccgcgctgcgcgacgcg
ctggcgacgcccgagcccgatgcgctgccgctcttcgacgtgctcaaccgctttcgcgtg
ctttgcgcgacgcgcacgggcgcgcgcggcgcggaggaagtcaacgcgcgcatggcggcc
gaggtgcgccgcgcggtgcgcgtgccgctcgcgctcggcgcgcactggttcgccggacgg
cccgtgatggtgacgcgcaacgattacgcgctcggcctcttcaacggcgacatcggcatt
gcgctgcccggcgcgcgcggtgcgctgcgcgtctggtttcgcggcgcggacggccgcgcc
cgggcggtgtcgcccgccgcgctgccgccgcacgacacggcgttcgcgctgaccgtccac
aaatcgcagggctcggaattcgacgacgcggcactgatcctgcccgcgtcgttcaatcgc
gtgctgtcgcgcgaactcgtctacaccgcgatcacgcgcgcgcgcgcgcgcgtgcaggtg
atcggctcgcgcgcggtgctcgcgctcgcgatcgcgacgcgcacggcgcgcgattccggc
cttgccgcacgaatcgccgatgcgctgcgcgcgcggcaggagggcgcgcgatga
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