Bifidobacterium pseudocatenulatum: BBPC_0006
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Entry
BBPC_0006 CDS
T03932
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bpsc
Bifidobacterium pseudocatenulatum
Brite
KEGG Orthology (KO) [BR:
bpsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpsc03032
]
BBPC_0006
03400 DNA repair and recombination proteins [BR:
bpsc03400
]
BBPC_0006
Enzymes [BR:
bpsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BBPC_0006
DNA replication proteins [BR:
bpsc03032
]
Prokaryotic type
DNA Topoisomerases
BBPC_0006
DNA repair and recombination proteins [BR:
bpsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BBPC_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BAR02684
UniProt:
C0BUC1
LinkDB
All DBs
Position
7492..10206
Genome browser
AA seq
904 aa
AA seq
DB search
MADENNSNEDGQFVPDGSMEPLSPQEADNTDYGLMVGERIQKKDLQQEMRDSYLAYAMSV
IVDRALPDVRDGMKPVHRRVIYAMYDGGYRPDRGYSKCARVVGEVMGKYHPHGDSAIYDT
LVRMAQSWSMRYTLVDGQGNFGSPGDDPAAAMRYTECRMAPLAMEMVRDIDKDTVDFLPN
YDGKTQEPTVLPARFPNLLCNGSSGIAVGMATNIPPHNMREVAEGVHWALDHPDASREEL
LENLIRIIKGPDFPTGATILGHKGIEQAYRTGRGLITMRAVVNTEEIKGRMCLVITELPY
QVNPDRLVVSIREAVRDGKIQGIADMRDETSGRTGQRLVLVLKRDAVPKVVLNNLYKHSQ
LQQTFGANMLALVDGVPRTLSLDAFIRHWVGHQLEVIARRTAYLKREAEERDHILQGYLK
ALDMIDEVIALIRASESAETARTGLMDLLDVDEVQADAILAMQLRRLAALERQKILDEHN
ELMRRIADYNDILAKPERQRKIVGDELDEIVSKYGDERRTKILPYSGEMNVEDLIAEENV
VVTVTHSGFIKRTKADEYRAQHRGGKGIKGAKLREDDVVDHFFLTSTHNWLLFFTNKGRV
YRLKAYELPEGSRDSKGQHVANLLQFGPDETIQTVLSIPNYEVAKYLVLATRSGKVKKTA
LAEYDSPRQGGLIAVRLMTGENGENADELIGAALCNAEDDIILVSKLGMSLKFQANDEQL
RPMGRQTAGVQGMKFREGDELLAMDVVWGDSDKDLFVVTNEGFAKRTAISEYRLQGRNGF
GVKAVQLAEGRGSLVGAVIVEEDDQIMAIMKSGKVIRSNVDEVKRTGRTTQGVTFAKPDK
NDEIISIARNEEKDDESAESGESVEKTESAEHGTNATVNEGASASSEAATEANAGNGDGE
NVEA
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
ttggcagacgaaaacaacagcaacgaagacggccagttcgtgcctgacggctccatggag
ccgttgagcccgcaggaggccgacaacaccgattacggcctgatggtgggcgaacgcatc
cagaagaaggatctgcagcaggaaatgcgcgattcctacctggcgtacgccatgtccgtg
atcgtggaccgtgcgctcccggacgtgcgcgacggcatgaagccggtgcatcgccgtgtg
atctacgcgatgtacgacggcggctaccgccccgaccgcggctactccaagtgcgcccgc
gtggtcggcgaagtgatgggtaagtaccatccgcacggcgattccgcgatctacgacacg
ttggtgcgtatggcacagtcgtggtctatgcgctacacgctggtcgacggccagggcaac
ttcggctcccccggcgacgatccggccgcggcaatgcgttacaccgaatgccgtatggct
ccgctcgccatggaaatggttcgcgacatcgacaaagacaccgtcgatttcctgccgaac
tacgatggcaagacacaggagccgaccgtgcttccggcacgattcccgaacctgttgtgc
aacggttcgtccggtatcgccgtcggtatggccaccaacattcctccgcacaacatgcgc
gaggtggccgaaggcgtgcattgggcgctcgaccacccggacgcaagccgcgaagagctg
ctcgaaaacctgatccgcatcatcaagggaccggacttccctactggcgcaacgattctc
ggacataagggcatcgaacaggcctaccgtaccggccgtggtctgatcaccatgcgcgcg
gtggtgaacaccgaagagatcaagggtcgcatgtgcctcgtgatcaccgagctgccgtac
caggtgaaccctgaccgactggtcgtctccatccgcgaagcggtgcgcgacggcaagatc
cagggcatcgccgacatgcgcgacgaaacctccggtcgtaccggtcagcgtctcgtgctc
gtgctcaagcgcgacgccgtgccgaaggtcgtgctcaacaacctgtacaagcactcccag
ctgcagcagaccttcggcgccaacatgctggcgctggtcgacggtgtgccgcgcacgctg
tctttggatgccttcatccgccattgggtgggccaccagctggaagtcatcgcacgccgt
accgcatacctcaagcgtgaggcggaggaacgcgaccacattctgcagggctatctgaag
gccctcgacatgatcgacgaggtcatcgcgctcattcgtgcttccgaatccgcggaaacc
gcgcgcacgggccttatggacctgctggacgtggatgaagtgcaggccgacgccattctg
gccatgcagctgcgccgactggccgcattggaacgtcagaagatcctcgacgagcacaac
gaactgatgcgtcgcatcgccgactacaacgacattctcgccaagccagagcgccagcgc
aagatcgtgggcgacgagcttgacgaaatcgtgtccaagtatggcgacgaacgtcgaacc
aagatcctgccgtactccggcgaaatgaacgtcgaagatctgatcgcggaagaaaacgtg
gtcgtaaccgttacacactccggtttcatcaagcgtaccaaggccgacgaataccgtgcg
cagcatcgcggcggcaagggcatcaagggcgccaagctgcgcgaggacgacgtggtggac
cacttcttcctcaccagcacgcacaactggctgctgttcttcaccaacaagggacgcgtg
taccgcctgaaggcgtacgagctgccggagggatcgcgcgattccaagggacagcatgtg
gccaacctgctgcagttcgggccggacgagacgatccagaccgtgctgtcgattccgaac
tacgaagtggccaagtatctggtgctcgccacccgttccggcaaggtcaagaagaccgcg
ctcgccgaatacgattccccgcgtcagggcggcctgatcgcagtgcgccttatgaccggc
gagaacggcgagaacgccgacgagctgatcggtgccgcactgtgcaacgccgaggatgac
atcattcttgtgtcgaagctgggcatgagcctgaagttccaggccaacgacgagcagctg
cgcccgatgggccgtcagaccgcaggcgtgcagggcatgaagttccgcgaaggcgacgag
ctgctggccatggacgtggtctggggcgattccgacaaggatctgttcgtggtcaccaac
gagggcttcgccaagcgcaccgccatcagcgaataccgtttgcaaggccgtaacggcttt
ggcgtcaaggccgtgcagctcgccgaaggccgtggctccctcgtgggcgcggtgatcgtt
gaggaagatgaccagatcatggccatcatgaagtccggcaaggtcatccgttccaacgtc
gacgaggtcaagcgcaccggccgcaccacccaaggtgtgacgttcgccaagccggacaag
aacgacgagatcatctccatcgcacgcaacgaggagaaggatgacgaatccgcggaatct
ggcgaatctgtggaaaaaacggaatccgcggaacatgggacgaacgcaaccgtgaacgag
ggtgcttcggcatcgtctgaagccgctactgaagccaacgctggcaacggcgatggcgag
aatgtagaggcatga
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