Bifidobacterium pseudocatenulatum: BBPC_0130
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Entry
BBPC_0130 CDS
T03932
Name
(GenBank) glycosyl hydrolase
Organism
bpsc
Bifidobacterium pseudocatenulatum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
Big_4
Trypan_PARP
F5_F8_type_C
BgaA-like_CBM
TonB_N
DUF7456
Motif
Other DBs
NCBI-ProteinID:
BAR02808
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Position
177063..180383
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AA seq
1106 aa
AA seq
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MQTANAADASTAPSVAGHAYNDLPVGNPDVTVTQIDNSALPATLRNPIGQNEGTNTPNDL
SQNYYSADASTLEYDGKLFVFTGHDEAEPTYGSFNMKDWGVYVTDNPESGKWTHYKTIAK
ADLFDWATGDGAYAGQVVVDDAGTADTADDWFYYYVPVKDKNAAAGADPFSIGVAKSKSP
LGPWVDAIGAPLLTTMQTQIETIDPAFFVDNDGTGYLHFGTFNSELAVKMQRDANTGRTS
YVAVETMDGTADGAPKIYNMRDADALANIPDYDASKDVLGSDYANQVNASLTLGNNGGAY
ANGPKGFFEAAWVFREGDTYYNVYDGGKPGSGVATCVESNYQACVQYSTSASPLGPWTYQ
GVIVESGSSTTMHPSIQRFGGKWWVTYHTGDKTGGTDFRRAVCIDEVTWNGGRMNAVSHP
TKAERLQPSRNVAPYASVDATYTETPAYKGSVNDGRVLETAVVPPNHWTNYRKMPQTQSS
DSLIYQWNGAVRVNGSKVWFDTDANALRAPASWKLQYLDADGSWKDVPNSSEYGVDTGKN
APNEVTFDAVTTTALKLDMTAQAVDGGYASVGVPEWEVYAQQGAVVAERPADVYAKTGDA
PELSNTVKVAYGSETVETPVLWRTVSASSYAQAGEFTVQGVVAGIETKQQADDLAAGNVA
VTVHVSDDYVKPADTIAPAVRVALAGTAGNDGWLVTSPIALITASDNAAAPIAKLELAVG
DGAWVTVGTNVNTAVKAVTGEGIVSVRARATDAAGNVSEIAAAEARVDATAPTVTASVDT
VSRTMTLTASDGAGSGVKTVEYRVGNGEWQQYEEGAAITASSSKRETVSYRASDIAGNMS
AAGVKDIPSDTSVPLAGYIEQDAVATDVDKKASSWTAGVAALNDGKTIPGDCTVDNACIW
GTWPNTGEMKLDYEWDREVTIDSSRVQFTSDGGGLGMPASWKLQYWDAGTNAFVDIPDAT
YTLVTNAPGAYGTDNGGWSEATWTDAVKTTKLRMVIQSGSASPAAAEWQVHAPEPTPDPT
PDPTPEPEPEPTPTPKPTPDIDNNGKQDGNNAEPSAKPQSSQQSQSQRKKKLSSTGVATT
AIVIAMTVLATAGCCIFVAKRGKLRN
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgcagacagccaacgcggccgacgcaagtaccgcgcccagcgtcgccggacacgcctac
aacgatctgccggtcggcaatcccgacgtcaccgtcacgcaaatcgacaacagtgcgttg
ccggcaacccttcgcaaccccatcgggcagaacgaaggaaccaatacccccaacgacctg
tcgcaaaactactattccgcagacgcatccacccttgaatacgatggcaaactcttcgta
ttcacaggacacgacgaggccgaaccaacctacgggtccttcaatatgaaagactggggc
gtctacgtaaccgacaatccggaatccggcaaatggacgcactacaagaccatcgccaaa
gccgacctgttcgactgggcaaccggcgacggagcctacgcaggacaagtagtagtcgac
gatgctggcaccgcagacacggccgacgactggttttactactacgtgccagtcaaagac
aagaacgcagccgcgggagccgacccgttctccatcggcgtggccaaatcaaaaagcccc
ctcggaccatgggtcgacgccatcggagcgccgttgctgactaccatgcagacgcaaatc
gaaaccatcgatcccgcattcttcgtggacaatgacggtaccggatatctgcacttcggc
accttcaacagcgaactcgccgtaaaaatgcagcgggacgccaacactggccgcacctca
tatgttgccgtggaaaccatggacggaacggcggatggagcgccgaaaatctacaatatg
cgtgacgccgacgcgctcgccaacatacccgactacgatgccagcaaagacgtgcttggc
agcgactatgcgaaccaagtgaacgcgtcgctgaccttgggcaacaacggcggcgcttat
gccaacgggcccaaaggcttctttgaggcggcatgggtgttccgtgaaggagacacctac
tacaacgtgtacgacggtggcaaacccgggtcgggagtggcgacctgcgtggaatccaac
tatcaggcgtgcgtgcaatactccacgtcggcaagccctcttgggccgtggacgtaccaa
ggcgtaatcgtcgaatcgggatcgtccaccaccatgcatccgtcgattcaacgattcggc
ggcaaatggtgggtcacctaccacactggagacaagactggtggtactgacttccgccgt
gcagtctgcatcgatgaagtgacgtggaatggcgggcgcatgaacgccgtttcgcatccg
accaaagccgaacggttgcaaccctcacgcaacgtggccccctatgcgtcagtggacgcg
acctacaccgaaacacccgcctacaagggttccgtgaacgacgggcgagtgctggaaact
gctgtagtaccgccgaaccattggacgaactatcgaaagatgccacaaacacaatcctcc
gattcactgatctaccagtggaatggcgctgtacgtgtgaatggatcgaaagtctggttc
gataccgatgcgaacgcattgcgtgcccctgcctcatggaaactgcaatatcttgacgca
gacggttcctggaaggacgtgcccaattccagcgaatacggcgtggatacaggcaagaac
gcgcctaatgaagtgacattcgacgcagtgaccaccactgcgctcaaacttgacatgacc
gcgcaagccgttgacgggggctatgcttccgttggcgttcctgaatgggaagtatatgcg
caacagggagcagttgtggctgaacggccagccgacgtctacgccaagaccggagacgcg
ccggaattgtcgaacacggtgaaagtcgcgtacggctcggaaacagtggaaactccggtt
ttgtggcgcacggtgtctgcttcttcgtatgcgcaggcgggtgagttcaccgtgcaaggt
gtggttgctggcattgaaaccaagcagcaggctgatgatctggcagccggcaacgtagcc
gtgaccgtacatgtttccgacgattacgtaaaaccggctgataccattgctcctgccgtg
cgtgtggcattggctggcacggctggcaatgatggttggctggtcacttcaccgatcgct
cttattacggcttccgacaatgcggctgcgccgatcgcaaaactcgaacttgcggtcggg
gatggcgcatgggtgaccgtcggaacgaatgtgaacactgcggtaaaggctgtgactggc
gagggtatagtgagtgtgcgtgcgcgtgccactgatgcggccggcaatgtgagcgaaatc
gctgctgcggaagcgcgtgtggatgctacggctcctacggtaaccgcctcggtagatacg
gtttcccgcactatgacattgaccgcctcagatggtgctggatccggtgtgaaaacggtg
gaataccgggttggaaacggcgaatggcagcaatatgaagaaggcgcggcgattactgct
tcttcgtcgaagcgcgaaacggtgagctatcgggcttcggacattgctggcaatatgtcg
gctgcgggcgtcaaagatattccatccgatacgtcggtgccgttggccggctatatcgag
caagatgccgttgctactgacgtggacaaaaaagcgtcttcttggacagctggtgttgcc
gcgcttaacgacggcaaaaccattccgggcgattgcacggttgataacgcctgcatttgg
ggtacgtggccgaataccggtgaaatgaagctcgactacgaatgggatcgcgaagtcacc
atcgattccagccgtgtgcaattcacctccgatggagggggcttgggaatgccggcgtcg
tggaaactgcagtattgggatgctggaacgaatgcgtttgtggatattcccgatgccaca
tatacattggtcaccaatgctcccggcgcttacggtaccgataacggcggatggagcgag
gcaacctggactgacgcggtgaagaccactaagctgcgcatggtgattcaatccggcagt
gcatcgccggctgccgccgaatggcaggttcatgcacctgaaccgactccggacccgacc
cccgatccgacgcctgagcccgagccggaaccaacgccaactccaaagccgactccggat
atcgataacaacggcaagcaggacggtaataatgccgagccttctgcgaaaccgcaatca
tcgcagcaatctcagtctcaacgtaagaagaagctaagctctacaggcgtcgctactacg
gcaatcgtcattgccatgacggtgctggccacggcggggtgctgcatcttcgtggccaag
cggggcaagctgcgtaactga
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