Bifidobacterium pseudocatenulatum: BBPC_0229
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Entry
BBPC_0229 CDS
T03932
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
bpsc
Bifidobacterium pseudocatenulatum
Pathway
bpsc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bpsc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BBPC_0229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpsc03019
]
BBPC_0229
03009 Ribosome biogenesis [BR:
bpsc03009
]
BBPC_0229
03036 Chromosome and associated proteins [BR:
bpsc03036
]
BBPC_0229
Enzymes [BR:
bpsc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
BBPC_0229
Messenger RNA biogenesis [BR:
bpsc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BBPC_0229
Ribosome biogenesis [BR:
bpsc03009
]
Eukaryotic type
90S particles
RNase
BBPC_0229
Prokaryotic type
rRNA processing factors
BBPC_0229
Chromosome and associated proteins [BR:
bpsc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
BBPC_0229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
BAR02907
UniProt:
C0BQV7
LinkDB
All DBs
Position
complement(301491..302318)
Genome browser
AA seq
275 aa
AA seq
DB search
MTQNNADASAVSEGEMTANALLEALGTTLEPDLLVEALTHRSFSHENPGAKNYERLEFLG
DAVLELVSTETLYKAHPDMNEGQLAKMRAKAVSEESLSKIAREKLNAGPYILLGHGESDQ
GGADKSSILCDIVESLIGATFIQHGIDEARRVVHHLVDETLAEVATEGPALDWKTSLTVK
AHGMGFGEPRYQMSVSGPEYAQVFTANVMLGESDEIISTGTGTSKRKAQLAAAEEGWKAL
DNRKPEAQNVRKHRKHHHKHSGNESNGSNGENTSK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgacccagaacaacgccgacgcatccgccgtttccgaaggcgagatgaccgccaacgca
ctgcttgaagcgctcggcaccacgctcgaacccgacctgctggtcgaagcgctcacccac
cgctccttctcgcacgagaatccgggcgcaaaaaactacgaacgtttggaattccttggc
gacgccgtgcttgagctcgtctccacggaaaccctgtacaaggcacaccccgacatgaac
gaggggcagcttgcgaaaatgcgcgcgaaagccgtttccgaggaatccttgagcaaaatc
gctcgcgaaaagctcaatgcaggcccgtacattctgctcggtcatggcgaaagcgatcag
ggcggcgctgataaaagctcgattctgtgcgatatcgtcgaatcgttgatcggtgcgacg
ttcattcagcatggcattgacgaggcacgtcgcgttgtgcatcatcttgttgacgaaacg
cttgcggaagtcgcgacggaaggcccagctctcgattggaaaacctcgcttaccgtcaaa
gcgcatggcatgggcttcggcgaaccgcgctaccagatgtcggtttccggtccggaatat
gcgcaagtgttcactgcgaacgtcatgctgggcgaaagcgacgaaatcatcagcaccggc
acaggcaccagcaaacgcaaggcgcaactcgccgcagccgaagaaggttggaaggcactg
gacaatcgcaagcctgaagcacaaaacgtccgtaagcatcgcaaacatcatcacaagcac
agcggcaacgaaagtaacggcagcaacggcgaaaacaccagtaagtag
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