Bifidobacterium pseudocatenulatum: BBPC_0365
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Entry
BBPC_0365 CDS
T03932
Name
(GenBank) tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
bpsc
Bifidobacterium pseudocatenulatum
Brite
KEGG Orthology (KO) [BR:
bpsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpsc03016
]
BBPC_0365
Enzymes [BR:
bpsc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BBPC_0365
Transfer RNA biogenesis [BR:
bpsc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BBPC_0365
Prokaryotic type
BBPC_0365
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BAR03043
LinkDB
All DBs
Position
451739..452659
Genome browser
AA seq
306 aa
AA seq
DB search
MLIAVRLRIDLAYDGTDFYGWAKQPDIRTVQGEIERVLHTILRVPEGDDNEPLRLTVAGR
TDTGVHASHQVCHLDINEETLARCVGHMQVEPVMALTRRLQRMLPNDIAIRSIKEAPEGF
DARFSALERTYVYRIADRSSEIDPRTRNSVLHIDDNLDIGAMNKAAEMTIGLHDFGSFAT
PNPGGTTIREVKTAYWRRIPQHPLIDDGTTMGERYRTPALESGLLCFTIVADAFARNMVR
SLVNGCVQVGIGKRSLDWFAGKMATPLREGSTGPIAPQGLTLEHIEYPEDDQLAIRAEAI
RAKRTL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgctcattgccgtgagattacgtatcgacttggcatatgacggcaccgatttttacgga
tgggcgaaacagcctgacatacgcaccgtgcagggggaaatcgaacgtgtgctgcatacc
attctgcgcgtgccggaaggcgacgacaatgagccgctgcgcctgaccgtcgcaggtcgt
actgataccggcgtgcacgcgtcgcaccaagtttgccatctcgacatcaatgaggagacg
cttgcacgttgcgtcgggcatatgcaggtcgaaccggtgatggcgttgacgcgacgactg
caacgcatgctgccgaacgatatcgccattcgttccatcaaagaggctcctgaaggattc
gacgcacgcttctccgcgttggaacgcacttacgtatatcgcattgccgaccgatcaagc
gaaatcgatccacgtaccagaaatagcgtgctgcatatcgacgataatcttgacatcggc
gccatgaacaaggctgctgaaatgacaatcggtctgcatgatttcggctcgttcgcaact
cccaatccaggaggaaccaccatacgcgaggtcaaaaccgcgtattggaggcgcataccg
cagcatccgcttatcgacgacggaaccaccatgggggagcggtaccgaacgcccgccttg
gagtcgggactgctctgcttcaccatcgtcgccgacgcattcgcacgcaatatggtgcgt
tcgttggttaacggttgcgtacaggttggtatcggcaaacgttccttggattggttcgcc
ggaaaaatggcgacgccgttgcgtgaaggcagcactggcccgatcgctccgcaaggattg
acgctcgaacatatcgaatatccggaagacgaccagttggcgattcgtgccgaagcgatt
cgtgcgaaacgtactttgtaa
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