Bifidobacterium pseudocatenulatum: BBPC_0372
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Entry
BBPC_0372 CDS
T03932
Name
(GenBank) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bpsc
Bifidobacterium pseudocatenulatum
Brite
KEGG Orthology (KO) [BR:
bpsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpsc03016
]
BBPC_0372
Enzymes [BR:
bpsc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BBPC_0372
Transfer RNA biogenesis [BR:
bpsc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BBPC_0372
Prokaryotic type
BBPC_0372
BRITE hierarchy
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BAR03050
UniProt:
C0BQE2
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All DBs
Position
459146..460210
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AA seq
354 aa
AA seq
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MTKKPEHSGLLVIDKPQGVTSHDVVAAVRGALHMKRVGHAGTLDPMATGVLVVGFGNATR
LLNYIVDHNKTYEATIRLGQRTTTDDAEGELLPGEWAASFPSRQAVEQLIAERFTGRIEQ
VPNVYSAIKVNGQRAYDLAREGKDVELKARPVTIEEFNVRQVRYGYTHSDRAGAELVGAV
VAEKASNGWIANIAPHEDMQPVMELDVTVTCSAGTYIRALARDLGEELGLGGHLTMLRRT
RVGRFSVNMPNVMSAHAESKTFTDREGMEVTRNRAVLDDAEHALDHALDPVASAAASMSM
LAVSEQEAADLRFGRRIAHDICTTTAAYVEETNDLVAILERAKRGEAKPVAVFN
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaagcctgaacattccggtctgctggtcatcgacaagccgcagggcgtcacc
agccatgacgtggtcgcggccgtacgcggcgccctgcatatgaaacgagtcgggcatgcg
ggcacgctcgatccgatggccaccggcgtgctggtggtcggattcggcaatgccacgcga
ctactcaactacattgtcgaccataacaaaacgtacgaggccaccattcgccttgggcag
cgcactaccacggacgatgccgaaggcgagttgctgccgggggagtgggcagcgagcttt
ccctcgcgtcaagctgtggaacagctgatcgcagaacgtttcaccgggcgcatcgaacag
gtaccgaacgtctactccgccattaaggtcaacggtcagcgcgcctatgatctggcgcgt
gaaggtaaggatgtggaacttaaggcacgtcctgtgaccatcgaagagttcaacgtacgg
caggtgcgttacggctacacgcatagcgatcgtgccggcgcggaacttgttggcgcagtc
gtggccgagaaggcaagcaatggatggattgccaacattgcaccgcatgaagacatgcag
cccgttatggaactcgacgtgaccgtgacctgttccgcaggcacttacattcgcgcgctc
gcacgcgatctgggcgaggaactcgggttgggaggccacctgacgatgttgcggcgcacg
cgcgtcggcagattctcagtgaatatgcccaacgtcatgagcgcccacgctgaatccaaa
acattcaccgatcgtgaaggcatggaagtgacgcgcaatcgtgcggtgcttgacgatgcc
gagcatgcgctcgatcatgcgctcgatcccgtggccagcgccgcggcttccatgagtatg
ctggccgtcagcgagcaagaggcggccgacttgcgtttcggacgcagaatcgcgcatgac
atatgtacgaccacggcggcgtacgttgaggaaaccaacgatttggtcgctatcctcgaa
cgtgcgaaacgcggtgaggccaaaccggtcgcggtattcaactga
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