Bifidobacterium pseudocatenulatum: BBPC_0374
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Entry
BBPC_0374 CDS
T03932
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
bpsc
Bifidobacterium pseudocatenulatum
Brite
KEGG Orthology (KO) [BR:
bpsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpsc03400
]
BBPC_0374
DNA repair and recombination proteins [BR:
bpsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BBPC_0374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
Zn_ribbon_LapB
ATPase
DnaB_C
ABC_tran
ChlI
Lon_C
Rad51
SLFN-g3_helicase
AAA_22
NACHT
AAA_16
EAD2
DUF7125
TniB
AAA_29
AAA_24
AAA
Isochorismatase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BAR03052
LinkDB
All DBs
Position
complement(461685..463133)
Genome browser
AA seq
482 aa
AA seq
DB search
MSQNIRIVSDMAKTSSQFVCSECGWNGPKWLGRCPECGQWGTIEEFHEARPAASKRTAAP
GRTSRTQSHMVPASAAKPITEIGTENISRISTGFTEFNRILGGGIVPGSVTLIAGEPGIG
KSTLLLETAGNVARLCAAQPERNTVLYISGEESQAQVRMRASRIGAVEPNLLLSATTDLS
TVLGLIEQSKPALAIVDSAQTIVSQEVDGISGGSTQVREVASALIDTAKTLDIPVLLVGH
VTKDGSIAGPRTLEHLVDVVCQFEGDAETALRMLRAVKNRFGPTDEVGCFDMSGEGIEEV
TDPSGLFLSSSNSASSAPVEGTCVTFTLDGHRSLPIEVQSLVTKSVLPTPRRAANGVDAN
RIAMLVAVLYRHGNVNLLANDLYISTIAGGQAREPGCDLAIVGALASAAKSKAIGRTTCA
IGEISLTGQVRPVPRLEYRLREAARLGFTTAVVPTLRREIAIPGLSIVQVDTLQDALGAM
LR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
ttgtcccaaaatatccgtattgtcagcgatatggcaaagacgtcctcgcaatttgtatgt
tccgaatgcggctggaacggcccgaaatggctgggccgctgccccgaatgcggccagtgg
ggcaccatcgaggaatttcacgaggcccgtcccgccgcttcgaaacgcaccgcggccccc
gggcgcacatcgcgcacgcaatcgcatatggtgcccgcttccgccgcaaagcccatcacg
gaaatcggcacggaaaacatttccagaatcagcacgggtttcacggaattcaaccgcata
ctcggcggcggcatcgtacccggctccgtgacgctcatcgcaggcgagccgggcatcggc
aaatcgacactgctgctggaaaccgccggcaacgtggcccgtctttgcgcggcgcaaccg
gaacgcaacacggtactgtatatttccggcgaggaatcgcaggcgcaggtgcgtatgcgg
gcatcacgcataggcgcggtcgagccgaatctgctactgtccgccaccaccgacctgtcg
accgtgctcggactgatcgagcaaagcaagcctgcgctggccatcgtcgattccgcacag
accatcgtctcgcaggaagtcgacggaatttccggagggtcgacgcaggtgcgcgaagtg
gcgagcgccctgatcgacactgcaaaaacgcttgatattccagtattactggtcggtcat
gtcaccaaagacggctcgattgccggtccgcgcacgttggagcatctcgttgatgtggtc
tgccaattcgaaggggatgctgaaaccgcgcttcgcatgctgcgcgcggtgaagaatcgt
ttcggtcccaccgatgaggtcggctgtttcgatatgagcggcgaaggcatcgaagaggtg
acggacccgtctgggctttttctttcatcatccaattccgccagttccgctccggtggag
ggcacgtgcgtgacgttcaccttggacggccaccgcagcctgcctatcgaagtgcagtcg
ttggtcaccaaatcggtattgccgacgcctcgccgtgcggcgaatggcgtggacgcgaac
cgcatcgccatgctggtggcggtgctatacaggcatggcaacgtcaatcttctggcaaac
gatctctatatttccacgattgctggaggtcaggcacgtgagccgggctgcgatctggcg
attgtgggcgcgttggcgagcgccgcgaagtcgaaggcgatcggccgcaccacgtgtgcg
atcggcgagatttcgttgaccgggcaggtgcgcccggtgccgcgactggaataccggttg
cgcgaggctgcccgtcttggcttcaccaccgctgtagtgccgacattacgtagagaaatc
gcaattcccggattgtcgatcgttcaggtcgacacattgcaggatgcgcttggcgccatg
ttgcgatag
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