Bifidobacterium pseudocatenulatum: BBPC_0384
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Entry
BBPC_0384 CDS
T03932
Name
(GenBank) seryl-tRNA synthase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
bpsc
Bifidobacterium pseudocatenulatum
Pathway
bpsc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bpsc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BBPC_0384
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bpsc01007
]
BBPC_0384
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bpsc03016
]
BBPC_0384
Enzymes [BR:
bpsc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
BBPC_0384
Amino acid related enzymes [BR:
bpsc01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
BBPC_0384
Transfer RNA biogenesis [BR:
bpsc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BBPC_0384
Prokaryotic type
BBPC_0384
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
BAR03062
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Position
475283..476569
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AA seq
428 aa
AA seq
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MLDIQFIREHADVVKESQRKRGESVELVDEVLRSDEVRRSSLKEFEAARAQQKEIGKKVA
AAPADEKAKLIAETKELSQKVSEYKAAADAAAEEYTTAMWKLSNVVEPEAPEGGEDDYVV
VKKVGQIRDFAAEGFEPKDHLTLGRGVAGIDMERGVKVGGSRFYFLRGQVARMQIAMLTM
AVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDEQYLVGTSEVALAGMH
ENEILDLSDGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYTKQEDSYKEHE
HLLAMEQEMLGKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRYRELTSTSNCTEYQ
ARRLNIRERMEDGGTRAVSTLNGTLATTRWLVAILENHQQKDGSIVIPQAMRAYMGGKEV
IEPTKWEA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatatccaattcattcgtgaacatgctgacgttgttaaggaatcccagcgcaag
cgtggcgaatcggtcgaactggtcgacgaggtgctgcgctccgacgaggttcgtcgttcc
tctctgaaggaattcgaggctgcccgtgcgcagcagaaggaaatcggcaagaaggtcgcc
gcggctccggccgacgaaaaggccaagctgattgccgaaaccaaggaactctcccagaag
gtttccgaatacaaggccgcagcggacgccgcagccgaagaatacaccaccgccatgtgg
aagctctccaacgtggttgagccggaagctccggaaggtggcgaagacgattacgtggtg
gtcaagaaggttggacagatccgcgatttcgcagccgaaggtttcgagccgaaggatcac
ctgaccctcggtcgtggcgttgccggcatcgatatggaacgtggcgtgaaggtcggcggt
tcccgcttctacttcctgcgcggccaggtggcacgtatgcagatcgccatgctcaccatg
gctgtggaccaggccgaagagcacggcttcacgctggccatcaccccgacgctggtgcgt
ccggaagtgatgcgcggcactggcttcctcaactcccacgccgacgaaatctaccgtctg
cgcgaacctgacgagcagtacttggtcggtacttccgaagtggcgctcgccggtatgcac
gagaacgagattctcgacctgtctgacggtccgctgcgttactgcggttggagctcctgc
taccgccgtgaggctggcgcagctggcaaggatacttccggcatcatccgcgtgcaccag
ttcgacaaggtggaaatgttcgtttacaccaagcaggaggactcctacaaggagcatgag
cacctgctggccatggagcaggaaatgctcggcaaagtcgaggtgccgtaccgcatcatc
gataccgctgccggcgatctgggctcttccgcagcccgcaagttcgactgcgaggcttgg
gtgccgacccagggtcgctaccgtgagctgacctccacttccaactgcaccgaatatcag
gctcgccgtctgaacattcgcgaacgtatggaagatggtggcacccgcgccgtttccacg
ctgaacggtacgctggccaccacccgttggctggttgccattcttgagaaccatcagcag
aaggacggctccatcgtcattccgcaggccatgcgtgcctacatgggtggcaaggaagtc
atcgagccgaccaagtgggaagcctga
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