Bifidobacterium pseudocatenulatum: BBPC_0490
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Entry
BBPC_0490 CDS
T03932
Name
(GenBank) putative helicase
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
bpsc
Bifidobacterium pseudocatenulatum
Brite
KEGG Orthology (KO) [BR:
bpsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpsc03032
]
BBPC_0490
03029 Mitochondrial biogenesis [BR:
bpsc03029
]
BBPC_0490
Enzymes [BR:
bpsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BBPC_0490
DNA replication proteins [BR:
bpsc03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
BBPC_0490
Mitochondrial biogenesis [BR:
bpsc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
BBPC_0490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_30
AAA_19
AAA_22
Pif1_2B_dom
Viral_helicase1
AAA_16
nSTAND3
DEAD
NTPase_1
SH3_13
AAA
AAA_5
AAA_24
TrwB_AAD_bind
SLFN-g3_helicase
Herpes_Helicase
AAA_11
AAA_14
cobW
TsaE
Zeta_toxin
UvrD_C_2
MeaB
AAA_18
AAA_25
NAT10_TcmA_helicase
ABC_tran
IstB_IS21
KdpD
AAA_7
DnaB_C
MatP
Motif
Other DBs
NCBI-ProteinID:
BAR03168
UniProt:
C0BQ10
LinkDB
All DBs
Position
606578..607984
Genome browser
AA seq
468 aa
AA seq
DB search
MRQAEALAILQSGASVFLTGAPGAGKTYVLNEFVRQARAEGAAVSVTASTGIAATHINGQ
TIHSWSGVGLANALTDNLIKTIRTRRKRKLQGADILIIDEVSMLHAWLFDMVDQVCRIIR
RDQRPFGGLQVVLSGDFFQLPPVSVGGRNHDLVTPSPEFVASRERYAKAGLNPDGFVTES
LVWRELNPAICYLTEQHRQDDGSLLTVLTDIRNGCVNDDDRNVLLTRLGTIPEPGQQAVN
LFPVNKQADTLNDMRLFEINEEPHEYFAEAAGPVNLVERLKKNMLAPERLQLKTGAAVMA
VRNDTDHQFVNGSLGTVRGFAAENKGGWPIVEFENGNIVTMKPNCWEMMDGDTVLASVNQ
VPLRCAWAITIHKSQGMTLERAVMDLRRTFAPGMGYVALSRVEGLQGLYLNGVNERMFLV
SPDAVRLDGELRLASAQASDMLAHDGIAAFRQNIAVPDGDEFAQDALF
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaggctgaggcattggcgattctgcaaagtggcgcgagcgtcttcctgacgggt
gcgccgggtgctggcaagacctacgtgctcaatgagttcgtgcgtcaggcccgtgccgaa
ggtgcggcggtgtcggtgacggcgtccaccggtatcgcggccacgcatatcaacgggcag
accattcattcatggagcggtgtcggacttgccaacgcgctcaccgacaatctgatcaaa
accatacgtacccgacgcaaacgtaagctgcagggcgctgacattctcatcatcgacgag
gtttccatgttgcatgcgtggctgttcgacatggtcgatcaggtgtgccgcatcattcga
cgtgaccaacgcccgttcggagggcttcaagtggtgctgtccggcgatttcttccagctt
ccgccagtgagtgtgggtgggcgcaaccacgatttggtcacaccaagcccggaattcgtg
gcttcccgcgaacgatatgcgaaagcgggactcaatccagatggtttcgtcaccgaatca
ttggtatggcgggaattgaatcccgcaatctgttacctgaccgaacagcatcgtcaggat
gacggcagtctgctcaccgtattgaccgatattcgcaacggttgcgtgaacgacgacgat
cgcaatgtgctcctcaccagactgggcacaatccccgaacctggtcaacaggccgtcaat
ctgtttcccgtcaacaagcaggcggacacgctcaacgacatgcgcctgttcgaaatcaac
gaggagccgcacgaatatttcgccgaagccgcaggaccagtcaatctggtggaacgtttg
aagaaaaacatgcttgcccccgaacgtttgcagctcaaaaccggggctgcggtgatggcc
gtacgcaacgacaccgaccaccaattcgtgaacggatcattgggtaccgtgcgcggattt
gccgccgaaaacaagggcggatggccgatcgttgaatttgaaaacggcaatatcgttacc
atgaagccgaattgctgggaaatgatggacggcgacacagtgctcgccagcgtcaaccaa
gtgccgttgcgctgcgcgtgggcgatcaccatccacaaatcgcaaggtatgacgctcgag
cgtgcggtgatggatttgcggcgcaccttcgcgcctggcatggggtatgtggcgctgtct
cgcgtggaaggcctgcaaggcctgtatttgaacggtgtgaacgaacgcatgttcttggtt
tcgcccgatgcggtgcgattggatggtgagttgcgtctcgcctcggcgcaggcatccgat
atgttggctcatgatggcatcgccgcgttccggcagaacattgccgttcccgacggtgac
gagttcgcgcaggacgcgctgttctag
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