Bifidobacterium pseudocatenulatum: BBPC_0595
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Entry
BBPC_0595 CDS
T03932
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bpsc
Bifidobacterium pseudocatenulatum
Pathway
bpsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BBPC_0595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpsc03400
]
BBPC_0595
Enzymes [BR:
bpsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BBPC_0595
DNA repair and recombination proteins [BR:
bpsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BBPC_0595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
Motif
Other DBs
NCBI-ProteinID:
BAR03273
UniProt:
C0BPP0
LinkDB
All DBs
Position
736524..738755
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AA seq
743 aa
AA seq
DB search
MSTEDAEQLALDGLAPRKRRKRAPAVKTPAAEHPIAQVVLDIQAIHLGQTFDYYVEEKYS
EAAQPGVMVRVRFGGQRVNGIIWKRTDTSETPESSLRFIERVVIDRVLVSESMRNDATLI
ADAFGGTRANILRLAVPPRVARVEQEQRIGNRTGIEKNGRIESLAKIERESYEQLQRQYG
NIDLLRTALEGQRFQAFVLDPLPGSHHWRQCVAWMVAAALLQGKPAVLVLPTMREIEDMA
ETLQSIGLRCFAPTQSSNGAYGGDFAILNAQMAPAERYRAYLAISGGQVRCVIGTRAAMY
APVDGNALFLILDDVCYQDADGMMPYANARGVLRLRAKAHNGVFVAMANARSVQSQWETD
AAHVGATQVSGFSTPIHAFPAVTKEASPWIRWLNRDELARLADSTIGARVPHTAVRVLSK
ALESGPVLLSIPQDGIGEALSCAKCHRQARCSYCTGPLERLRDGSVRCRWCGVATVQWAC
PACHNERMRVVRVGAAGTAQELSRLFRGVPIVLSTPSQPRGIVPDIGFAPQLVIATPGAE
PRVRGRNPSECEYRAVAILDAWTSLYAFGIDAGVDTLTSWMRAVSLCAPRIRGGQALLIG
ETDPTLAQSLMLWNSTLLAQTELREREQTALPPVFAAACVWGRRDAVKVTLERIGALGGG
DLSAIETTEGMLPSVLGPVPIPQPRTIDSRELEGTADRVKAVVRVPQSRRGELALRLRSA
SARHVAAREPGELRFQLDPKERI
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgaggatgccgagcagctggcgcttgacgggctcgccccgcgcaagcggcgc
aagcgtgcgcccgcggttaaaacgccggctgcggagcatcccatagcccaagtggtgctg
gatattcaggccatccatttggggcaaaccttcgactattacgttgaggagaagtattcc
gaagccgcccagcccggcgtaatggtgcgtgtccgcttcggcgggcaacgggtcaacggc
atcatttggaaacggaccgataccagcgaaacccctgaatcgtcattgcggttcatcgaa
cgggtggtcatcgatcgtgtgcttgtgtcggaatccatgcgtaacgatgccacacttatc
gcggacgcattcggcggaacgcgagccaatatcctgcgtttggcggtgcctccgcgcgtg
gctcgcgtcgaacaggaacaacgtatcggcaatcgaacgggtattgaaaaaaacggacgt
atcgaatcgcttgccaagatcgagcgggaatcgtacgagcagctgcagcggcaatacggt
aatatcgacctgcttcgtacggcattggaagggcaacgtttccaagcgttcgtgctcgac
ccattgccgggatcccatcattggaggcagtgcgtggcctggatggtggccgcggcctta
ttgcagggcaaaccggcggtactggtgttgccgaccatgcgtgagattgaggacatggcc
gaaacgttgcagtcgatcggcttgcgctgtttcgcgccaacccaatcatccaacggtgcg
tacggcggcgatttcgccattctgaacgcgcagatggcgcctgctgaacggtatcgtgcg
tatctggccatcagtggagggcaggtgcggtgcgtgatcggcacacgggcggcgatgtat
gcgccggtggatggcaatgcgttgttcctcattctcgatgacgtgtgctatcaggatgcc
gatggcatgatgccttacgccaacgcccgcggagtgttgcggttacgtgcaaaagcgcat
aatggcgtgttcgtcgcgatggccaatgcgcgcagtgtgcaaagccagtgggaaaccgat
gcggcgcatgtcggtgccacccaggtcagcggtttcagtacgccgattcacgcattccct
gccgtaaccaaggaagcgagtccttggattcgttggctgaaccgtgacgaattggcaaga
cttgcggattcgaccatcggagcgcgtgtgccgcacactgcggtgcgagtgctgtcgaag
gcgttggaaagcggtccggtgctgttgagcattccgcaggatggcatcggtgaagcattg
agctgcgcgaaatgccaccgtcaggctcgctgctcgtactgcacgggtccattggaacgg
ttacgggatgggtcggtgcgttgtcgttggtgcggtgtcgccactgtgcaatgggcttgc
ccggcatgccataacgaacgtatgcgcgtggttcgtgtgggtgccgccggaactgcgcag
gagctgagccgactgtttcgtggcgtgcccattgtgctttcaacgccgagccagccacgc
ggcattgttcccgatatcgggtttgcgccgcagttggtcatcgccactcccggcgcagaa
ccccgtgtacgtgggaggaacccctcggaatgcgaataccgggccgtggccattctcgac
gcatggaccagcttgtacgccttcggcattgacgcgggcgtagacacgttgacgtcgtgg
atgcgcgcggtttcgctgtgcgcgccgcgaatcaggggaggtcaggccctgttgatcggc
gaaaccgatcccacgctcgctcaatcgttgatgctttggaattcaacgttgctggcgcaa
accgaattgcgggaacgtgaacaaaccgcattgccgcctgtgtttgccgccgcatgcgta
tggggacgtcgtgacgcggtgaaggtcacgctggaacgtatcggcgcgttgggtgggggt
gacctgtccgccatcgaaaccaccgaaggcatgctgccgtccgtattggggccggtacct
attccgcagcctcggaccattgattcgcgcgaattggaaggcactgcggatcgtgtcaag
gcggtggtgcgtgtgccgcaaagtcgccgaggtgagttggcgttgcgtttgcgttccgcc
agtgcccgccatgtggccgcgcgcgaaccgggagaactgcgttttcagcttgatccgaag
gagcgaatctga
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