Bifidobacterium pseudocatenulatum: BBPC_0964
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Entry
BBPC_0964 CDS
T03932
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bpsc
Bifidobacterium pseudocatenulatum
Brite
KEGG Orthology (KO) [BR:
bpsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpsc03009
]
BBPC_0964
Enzymes [BR:
bpsc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
BBPC_0964
Ribosome biogenesis [BR:
bpsc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BBPC_0964
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
BT_2262-like_C
Motif
Other DBs
NCBI-ProteinID:
BAR03642
UniProt:
C0BTK3
LinkDB
All DBs
Position
complement(1181975..1182748)
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AA seq
257 aa
AA seq
DB search
MPNAYSRAAKAHTHDNEGIRLQKLLAQAGFGSRRKCEEIITEGRVEIDGELVTELGTRVD
PKHQEVRVDGSRVRVNPNHVTLALNKPKRVLSAMEDPKGRYTLSDIVGDKYDRIFHMGRL
DYDSEGLILMTNDGELSQHVMHPKYEVEKTYIATLEGRISGQVCRRLVTTGVQLDDGWIK
LDRCAILDASRDSTLVKVVLHSGKNRIVRRIFGSIGFPVKRLVRTQIGPIKLGDLKSGSY
RVLSQTEVRSLSKAVGL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgccaaacgcatattcccgcgccgcgaaggcgcacacacacgataatgaaggtatccgt
ctgcagaagcttcttgctcaggcaggattcggatcccgtcgcaaatgtgaagagatcatt
actgaaggacgtgtcgaaatcgacggcgagcttgttaccgaattgggcactcgcgtcgat
ccgaaacatcaggaagtccgtgtggacggctcccgtgttcgcgtgaatcccaatcatgtc
acgctcgctttgaacaagccgaagcgtgtgctgagcgccatggaggatccgaagggacgc
tacaccctgagcgatatcgtcggcgacaagtatgaccgtattttccacatgggccgtctg
gattatgattccgaaggcctgattctcatgacgaacgatggcgagctcagccagcacgtc
atgcaccccaagtacgaggttgagaagacctacatcgccacgttggaaggtcgcatcagc
ggtcaggtgtgccgccgactggtcactacaggcgtgcagctcgacgatggttggatcaag
ctcgaccgttgcgcgattcttgatgccagccgcgacagcacgctggtcaaggttgtgctg
cattccggcaagaaccgtatcgtccgtcgcattttcggttcgatcggattcccggtcaag
cgtctggtacgcacccagatcggcccgattaagcttggcgatctgaaatccggatcgtac
cgtgtgctttcgcagaccgaggtgcgttccctgtccaaggcggtgggcctgtga
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integrated database retrieval system
