KEGG   Bifidobacterium pseudocatenulatum: BBPC_0974
Entry
BBPC_0974         CDS       T03932                                 
Name
(GenBank) holliday junction resolvase
  KO
K01159  crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
Organism
bpsc  Bifidobacterium pseudocatenulatum
Pathway
bpsc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpsc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BBPC_0974
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpsc03400]
    BBPC_0974
Enzymes [BR:bpsc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.10  crossover junction endodeoxyribonuclease
     BBPC_0974
DNA repair and recombination proteins [BR:bpsc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BBPC_0974
    RecFOR pathway proteins
     BBPC_0974
SSDB
Motif
Pfam: RuvC
Other DBs
NCBI-ProteinID: BAR03652
LinkDB
Position
complement(1192150..1192731)
AA seq 193 aa
MIILGVDPGLTRCGVGVIEAGAYRRLSFIHVDVVRSDPKMSQDLRLLAIYNGLVEKIERF
APDTVSIERVFAQENRNTVLGTAQAAGLAMLAAAQRGIPVALHTPTESKMAITGNGKAEK
IQMERMVARILGLNTLPKPADAADALAIAICHALRPAGALQGGEREQHLTDAQRQWALAS
QKAARQRGVRRGM
NT seq 582 nt   +upstreamnt  +downstreamnt
gtgattattcttggcgtcgaccccgggctgactcgctgcggggtcggcgtgatcgaagcc
ggcgcataccgccggctttcttttattcatgtggacgtggtacgttccgatccgaaaatg
tcgcaggacttacgtctgttagccatctataacggtttggtggaaaagatcgaacggttc
gcaccggatacggtgtccatcgagcgtgtgtttgcacaggagaatcgcaacaccgtactg
gggactgcacaggccgccggactggccatgctggctgcggcccagaggggcattcccgtc
gccttgcatacgcccactgaatcaaaaatggcgattaccggcaacggcaaggccgaaaag
attcagatggaacgcatggtcgcccgtattctggggctcaataccttgcctaagcccgcc
gatgccgccgatgcgttggctatagcgatttgtcatgcgcttcgccccgcaggcgcgtta
caggggggagagcgtgaacaacacttgaccgatgcacagcgtcaatgggctctggcctca
cagaaggcggcgcgacaacgcggcgtccgtaggggaatgtag

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