KEGG   Bifidobacterium pseudocatenulatum: BBPC_1405
Entry
BBPC_1405         CDS       T03932                                 
Name
(GenBank) putative helicase
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
bpsc  Bifidobacterium pseudocatenulatum
Brite
KEGG Orthology (KO) [BR:bpsc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpsc03400]
    BBPC_1405
Enzymes [BR:bpsc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BBPC_1405
DNA repair and recombination proteins [BR:bpsc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BBPC_1405
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C Zn_ribbon_Top1 UvrD_C_2 AAA_11 AAA_30 DEAD DUF3638 CobA_CobO_BtuR
Other DBs
NCBI-ProteinID: BAR04083
LinkDB
Position
1693377..1695437
AA seq 686 aa
MGLLSKFMNALIGEPPVSKTATQPGPKLARQNVPNPTQQQTTQRKSTVQSRQTQQLTQPS
QSSQLARSSYRAQTQTTARNTSVTTNRSRAQSHANSQPAQKLMPQPMLPAEQIERARNII
GKIEKHELSDEQISAIAGAGHNTLVLAGAGTGKTTTIVGYIAWLLNTGTATPEEILVLSF
TKASADEMSSRITQSTGKVIRACTFHSLGLEICRSSTIANRPIIDGHTSNNVVRNAFEYL
LEHNVSYRLLAFKLMSQQLLDKYSTAARLENFQLPTDDYAFNQYRQNLIDTTQTIIQHMR
SNNIDIAGMQTLNERYGGKNIGRNREMLQLIEPLYHAYIQNFKTNNGIDFPGMIVDAISC
VNNGSYRHPYKYVLIDEYQDMSRPRYELIRALRLQHDFSLFCVGDDWQSIYRFAGSDIHL
ILDFDRIWRAWGPTFMFQITTTRRFRQSLIDASGAFVMRDTNLYVKHLNNPSDKKDYSLK
ALGGHTEEERFNVIVEQLRKLPKTASVLLLGRYRSDINLMIRCDQEGLFSIDQSTGNIRF
LEKPDMDIRFMTAHASKGLQRDFVFLLCCSGGLKGFPSTIPEEPLLGLLLPEVERCPHAE
ERRLFYVAMTRCKKKLFFIVDQTRPSRFMYELHSKICPNIFRGVKLPPQCPNCGEALSLR
HNRNDPNRSFYGCTGFPNCRYTQQAK
NT seq 2061 nt   +upstreamnt  +downstreamnt
atgggattgctgagcaagttcatgaacgcgcttattggagaaccgcccgtctccaaaacg
gcgactcagcccgggcccaagcttgcgcggcaaaacgttcccaatcccacgcaacagcag
acgacgcaacgcaagtccactgtacaatcacgtcaaacgcaacagcttacgcaaccatcc
caatcatcacagttggcgcgatcgtcataccgcgcgcaaacacaaaccacagctcgcaat
acttctgtcacaacgaatcgttcgcgagcgcaatctcatgccaattcacaaccggctcag
aaacttatgccgcaaccaatgctccctgccgagcagatcgaacgggcgcgaaatatcatc
ggcaaaatcgaaaagcatgagttaagcgacgagcagatcagcgccatcgccggagcgggt
cacaatacgctagtgctcgcaggtgcgggaaccggcaaaaccactaccatcgtcggctat
atcgcatggctgctgaacacaggaaccgccactcccgaagagattctggtgctatcgttc
accaaagcttccgccgacgaaatgtcgagccgcatcacgcaaagcaccggcaaagtcatt
cgcgcatgcaccttccatagcctcggactggaaatctgccgttcctccaccattgccaat
cgtccaattattgacgggcacacgtcaaacaatgtggtgcgtaacgcatttgaatacctg
cttgaacacaatgtttcctatcgtcttctggcatttaaacttatgtcgcaacagttgctt
gataaatattccacagctgcacgacttgagaatttccagcttccaacagacgattatgca
ttcaatcaatatcgtcagaatcttatcgataccacacaaactattattcagcacatgcga
tcaaacaatattgacattgccggaatgcaaacccttaacgaacgttatggcggtaaaaac
atcggtcgcaatcgtgagatgctgcagctcatagaaccgctttatcatgcctatatacag
aatttcaaaaccaataatggcattgattttccgggaatgatcgttgacgccatcagttgc
gtcaataatggctcgtaccggcacccatataaatatgtgctgattgacgaatatcaggac
atgtcacgaccgcgctatgaattaattcgtgcgcttcgcttacaacatgatttctcacta
ttctgcgttggcgatgattggcagtcgatttatcgttttgcaggcagcgacattcatctc
attctcgatttcgaccgaatttggcgcgcctggggtccgaccttcatgttccagatcacc
accacacggcgcttccgtcaaagccttattgacgcaagcggagcattcgtgatgcgcgat
accaatctgtatgtcaaacatctcaataatcccagcgataagaaggattattcgttgaaa
gcacttggcggacatactgaggaagaacgattcaatgtgattgtcgagcagttgcgcaaa
ctaccgaaaaccgcgtccgtactactgctgggccggtatcgcagcgatatcaatctcatg
attcgttgcgatcaagaaggtctgttctccatcgaccaaagcactggaaatattcgtttt
ctcgaaaaaccggatatggatattcgtttcatgaccgctcatgcgtccaaaggattgcaa
cgcgacttcgtatttctgctctgctgttccggcggattgaaaggctttccaagcacgatt
cccgaagagccgctgcttggtctgctactgccggaagtggagcgatgcccgcatgcggag
gaacggcgactgttttacgtggcgatgacccgatgcaagaagaaactgttcttcatcgtg
gatcagacccgtccgtcgcgattcatgtatgaactgcatagcaagatctgtccgaacatt
ttccgaggagtcaagcttcctccgcaatgcccgaattgcggcgaagccctaagcttgcgg
cacaatcgcaacgatccgaaccgctcattctacgggtgcaccggcttcccaaactgccgc
tacacccaacaagcaaaataa

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