Bifidobacterium pseudocatenulatum: BBPC_1445
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Entry
BBPC_1445 CDS
T03932
Name
(GenBank) putative adhesin
KO
K20276
large repetitive protein
Organism
bpsc
Bifidobacterium pseudocatenulatum
Pathway
bpsc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bpsc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BBPC_1445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
fn3
Cadherin_5
Pur_ac_phosph_N
Cadherin_4
Bact_surface_Ig-like
Ig_DSCAM-DSCAML_C
HSP20
Motif
Other DBs
NCBI-ProteinID:
BAR04123
LinkDB
All DBs
Position
1755279..1761314
Genome browser
AA seq
2011 aa
AA seq
DB search
MDKRKNAADQPAQSHERQLRFGSMMRKLLLPSGSRRWITPIVMLLLLLGIIAGAFIVSSV
TQRHVQLDDGTVWITSLKDRKAARFNAKNKDVDAGVSSAASRFDVAQHDGDTVISEGTKA
SNIAASTISETGNTAIKTDIETIIGGNTAAFINTKTGNVWVGSAADVKSVNPTTDKPNMK
LGSGGKIAVTHDGTVYGYRTSDGAVLSIKGPQDTREQVGTIGGAPHAESFTVIGETPVVA
AKGTVYWPQGSAAINLQGSMTLQAPSTDGKQNGWVAVATPRGLATVNLSTKKTSETPNSG
KGEAAQPVSTGGCVFAAWAQKANNYAKVCSVDGSDTAFDTLTNINATSELIFRTNHRLVI
LNDVVNGNVWNPQESTKVIKIQWNKVETKQSKQQEQNNDSANNQHNFSKTCSSQSGQIKA
EDDSFGARTGSQQILDVLRNDEQTDCSVLRITSVSAPDGANISVSPVYDGRYLQLDASAA
SEGSVSFSYEISDGRGQTSNANVSLTLVGGDDNAPQQTDTPPEIDVEQGAAYTTNALGSF
SDPDGDPLTLVSATPQNTDQVTVSTRADGQLVFNAGSMSSGRAGIEVTVSDGQQTGTGMV
YFSVKPANTLAAVIDPAVKQTTPDTRTTIALKQYVHGTSAEPAQLTAVETPSGASTTMNA
TDMSFTFSASNPGTYYVPYTITQGSIPSTGLARIEVQAVTGDSAKPIAANDVALLGADNT
AIVEPLSNDVDPMGGVLSVTSVTADAASGIKTGVVSNKRVYITARQVPTEPVQIKYSVAN
AAGTSTGVIVLQPPALTTSNSVPKADNITTQVRTDGIVSIDVLDHVTYSDGTTVSLQNDL
QYDKNTFKGLVFVSGNTVRYQASDQTGSFPVTYTVKDNLGNAASATITINVHQKDASNKA
APTPSDVEAQVAAGQKVQIPITLTGIDADGDDVQLLGLGNKAPTLGRISEVGATYLVYEA
YADSTGTDTFSYAVEDWTGQRSQAQIRVGVFTSGTDSGVYARDDEITLRPNTAATVPVAQ
NDISGDNTDLAVSENVESQDISNVTVADNALAFTTPQQAGTYYVVYTVKDKAGLSDTATL
TVNVDDNATIEPPTAYDYRVPSSATIDKKSIDVDVSQWIANPSGSADELQVAVDDSATDH
AHVKGGDKSTTISVELTDEARAVPYTVTNTTYNITSTAFIQVPAYGVFPPTLRPKAPALK
VNARETITINIADYVRVGAGKIAYVDGADSVSATKAADGDLYVNDQTLKFTASKDYSGPA
SITFTAVDGKRDKNDNVKIINSAVLTLPITVIGRDMPAPTFSSSTIDVVAGESATTIDLT
ALTHSASDLYDDEKQYTYSGGTDSDQVSAKVSSNGKLTVSADKTASPGTTVSVPISIQYS
KGTVSAGVTVRVTASNRPLARINAKTVKVKAGSSEEVNLLSDAYNPFPDSALTVTGCTSD
GASKLTVDCPSNGVVSISASSDIGASTNKVIVNVRDATNTKEREVTGTINVLVMDKPDAP
LLSPIAGDPQDGAVNLSWTAGSSNGSPISEYKVSWGGDGSGEKSCGSVTSCQITGLKNGK
TYSFKVQAKNEVGWSKESNGVEGTPDKLPDAPTDVKAEASKNTITVTWKALEGNFSAVDK
YQVTLSGPNVANPAQEVTGTSITFKFDDNAITDGASYTATVKAHNKVNWSQPSTASNAVS
PWGTPDNPTISADQSGDKIVVRGRINDARNSKYQSITVSIEGEDKSVETSAKDYSVEFDI
KNEWYYRKLKPTITVVTERSGSLRNEASVSTFTAVDPPTNVKLELNNNTCVATWSRKGGR
VTGFVVKAKGYYDDDVHESRAEWPLSGDWSTCDTVSVQQYFIDTSHLSDPAIATDNTVGN
KKPAEITLPSSLTWDTQNANIIHVNGGSWEAHGRSVKGQIVITPAGESSHTYDWPANGTL
DVSDITSPSGTRCDWEVRVITTAGEPEINATKKSSDPVTGVRYEEKTPDPEPGPTPDNGE
TQSSIDTNASAISLRTGLAGKQARGISFTVK
NT seq
6036 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacgcaagaacgcagccgatcagccggcacaatcgcacgaacgtcaattgcgc
ttcggatcgatgatgcgcaaactgctgttgccgtcgggaagcagacggtggatcacgccg
atcgtcatgctgcttctgctgctgggtatcatcgcaggcgcgttcatcgtcagttcggtg
acgcaacggcatgtgcaacttgacgacggcaccgtgtggatcacgtcgctgaaggaccgc
aaagccgcacgattcaatgcgaagaacaaggatgtggacgccggagtctcatccgcagcc
tcccgtttcgacgtggcacagcatgatggcgacacagtgatctccgaaggcaccaaagcc
agcaatatcgcggcttccaccattagcgaaaccggcaacaccgccatcaaaacggatatc
gaaaccattatcggaggcaataccgcagcgttcatcaacaccaaaaccggcaatgtgtgg
gtgggatccgctgccgatgtgaaatccgtcaaccccaccaccgacaagccgaacatgaaa
ctgggatccggcggaaaaatcgcggtgacgcatgacggaaccgtatacggataccgaact
tccgatggcgcggtgctgagcatcaaagggccgcaagacacgcgcgagcaagttggcacg
ataggaggcgcaccgcatgccgaatcgttcaccgtcatcggcgaaaccccggtcgtggcg
gcaaaaggcaccgtgtattggccgcagggaagcgcagccatcaatctgcagggcagcatg
accttgcaggccccttccacggacggcaaacagaacggatgggtggccgtggcgacacca
cgcgggctcgcaacggtgaacctcagcaccaagaaaacctctgaaacaccgaattccggc
aagggcgaggccgcccaaccggtgtccacaggcggatgcgtgttcgccgcatgggcgcag
aaagccaacaattacgccaaagtgtgctccgtagacggttcggatacggcattcgacacc
ctgaccaacatcaacgccacttcggaactgatattccgcaccaaccatcgtctggtcata
ctcaacgacgtggtcaacggcaacgtttggaatccgcaggaatccaccaaggtcatcaaa
atccaatggaacaaggtggaaaccaaacagtcgaagcaacaggaacagaacaacgacagc
gccaacaaccagcataatttcagcaagacctgctcgtcgcaatccggccagatcaaagcc
gaagatgattcgttcggcgcgagaacaggatcgcagcagatcctcgacgtgctccgcaac
gacgaacagaccgactgctccgtactgcgcatcacctcggtaagcgcccccgacggcgcc
aacatcagcgtttcccccgtatacgacggacgatatctgcagctcgacgcttccgcggca
tccgaaggatccgtatcgttcagctatgaaatctccgacggacgcgggcaaacctccaac
gccaacgtaagcctcacactggtaggcggggacgacaacgcgccccagcaaaccgatacg
ccaccggaaatcgacgtggaacaaggagcggcctacaccaccaacgcgctgggcagcttc
tccgatcccgacggcgacccgctcaccctcgtatccgcaaccccgcaaaacaccgaccag
gtgaccgtttccacacgcgccgacgggcagctcgtgttcaacgcgggatccatgtcttcc
ggacgcgccggcatcgaagtgaccgtttccgacggccagcagaccggcaccggcatggtg
tatttctcagtgaaaccggccaacacgctggccgcggtgatcgatccggccgtcaagcag
accacgccagacacccgcaccaccatcgcgctcaaacaatacgtgcatggcacctcggcc
gaacccgcgcagctgaccgccgtggaaaccccatccggcgcatccaccaccatgaacgcc
accgatatgtcgttcaccttcagcgcatccaaccccggcacctactacgtgccctacacc
atcacacaaggatccatcccctcgaccggcctggcccgcatcgaagtgcaggcggtgacc
ggagactccgccaagcccatcgcagccaacgacgtggcactgctcggcgccgacaacacc
gcaatcgtggaaccactgtctaacgacgtcgacccgatgggtggtgtgctatccgtgacc
agcgtgaccgccgatgcggcgagcggcatcaaaaccggcgtcgtaagcaacaagcgcgtc
tacatcaccgcacgacaggtaccgaccgagcccgtgcagatcaaatacagcgtcgccaac
gcggcaggcacgtcaaccggcgtgatcgtactgcagccaccggcactgaccacctccaac
tccgtgccgaaagccgacaacatcaccacgcaggtacgcactgacggcatcgtctccatc
gacgtgctcgaccacgtgacctactccgacggcaccacggtaagcctgcaaaacgacctg
caatacgacaaaaacacgttcaaaggactcgtattcgtatcaggcaacaccgtacgatac
caagcatccgaccaaaccggatccttccccgtaacgtacaccgtcaaagacaatctcggc
aacgcggcatccgccacaatcaccatcaacgtgcatcaaaaagacgcttccaacaaggct
gcgccaacaccatccgacgtcgaggcgcaagtcgcggccggccaaaaagtccagatcccg
atcaccttgaccggcatcgacgccgacggcgacgacgtgcagctgctcggtctcggcaac
aaggcgccgacactcggacgcatcagcgaagtcggcgccacctacctggtatacgaagcc
tatgccgactccacaggaacggacaccttctcatacgccgtcgaagactggaccggccaa
cgatcccaagcgcaaatccgcgtaggcgtattcacatccggcaccgactcgggcgtatac
gcgcgcgacgacgaaatcacattgcgccccaacaccgcagcaaccgtgcccgtggcgcaa
aacgacatctccggagacaacaccgacctggccgtcagcgaaaacgtcgaatcgcaagac
atcagcaatgtgaccgtggcggacaatgcgctcgccttcaccactcctcagcaggcgggc
acctattacgtggtgtatacggtcaaagacaaggcaggattgtccgacaccgcgacattg
acggtgaacgtggacgacaacgccaccatcgaaccgccgacagcatacgactaccgtgtg
ccatcttccgcgacgatcgataagaaatccatcgacgtggacgtttcgcaatggatcgcg
aatccttccggcagcgccgacgaactgcaggtggccgtggatgattccgccaccgaccat
gcgcatgtcaagggcggtgacaagtccacgaccattagcgtggaattgacggacgaggca
cgagccgtgccgtacaccgtgaccaacacgacatacaacatcacgtccactgcgttcatc
caagtgcccgcgtacggcgtgttcccgccgacccttcgaccgaaggcgccggcattgaag
gtgaacgcacgcgagacgatcaccatcaatatcgccgattatgtgcgcgtgggcgcaggc
aagatcgcgtatgtggacggcgccgattcggtgagcgccacgaaggccgcggacggcgac
ctgtatgtgaacgaccagacgttgaagttcaccgcatcaaaggattattccggtccagcg
tccatcaccttcaccgcggtggatggcaaacgcgacaagaacgataatgtgaaaatcatc
aattcggcggtgttgacgttgccgatcaccgtgatcggacgtgacatgcccgcgccgacg
ttctcctcgtccaccattgacgtggtcgcaggagaaagcgccaccaccatcgatctgacc
gcgttgacccattcggcgtccgacctgtatgacgatgagaagcagtacacgtattcgggt
ggcaccgattccgaccaggtgagcgccaaggtgagttcgaacggcaagctgaccgtgtcc
gccgacaagaccgcttcgccgggaacaacggtgagcgtgccgatttcgattcaatattcg
aagggcacggtgagtgcgggcgtcacggttcgtgtgacggcctccaacaggcctttggca
cgcatcaacgcgaaaaccgtgaaggtcaaggcaggatccagtgaggaagtgaacctgctg
tccgatgcgtataatccgttccccgattccgcattgaccgtgaccggatgcacgtccgat
ggcgcgtcgaagctgaccgtggactgcccgtccaacggtgtggtgtcgatcagcgcctcg
tccgatatcggcgcgagcaccaacaaggtgatcgtcaacgtgcgcgatgccaccaatacg
aaggaacgtgaggtgacgggcaccatcaacgttttggtgatggacaagccggatgcgccg
ctgctctcccccatcgccggagacccgcaggatggcgcggtgaatctgagttggacggcc
ggctcttcgaacggcagtccgatcagcgaatacaaggtgtcgtggggcggcgacggttcc
ggcgagaaatcgtgcggatccgtgacctcctgccaaatcaccggcttgaagaacggcaag
acgtactcgttcaaggtgcaggccaagaatgaggtcggctggtcgaaggagtcgaatggc
gtggaaggcacgcctgacaagcttccggacgcgccgaccgatgtgaaggccgaagctagc
aagaacaccatcactgtcacatggaaggctttggagggtaatttctccgccgtcgacaag
tatcaggtgacgttgagcggtccgaatgtggcgaatccggcccaggaagtcactggcacc
agcatcacgttcaaattcgacgacaatgcgatcaccgacggcgcatcctataccgccacg
gtcaaggcgcataacaaagtgaactggagccagccctccacggcatccaatgccgtttcg
ccttggggtacgcctgacaatccgactatttccgccgatcaatcaggcgacaagatcgtg
gtgagaggacggatcaatgacgcacgtaactcgaaataccagtcgattacggtaagcatc
gagggcgaagacaaatccgtggagacaagcgccaaggattattccgtcgaattcgacatt
aagaacgagtggtactacagaaaacttaagccgacgattaccgtggttacggaacgcagt
ggctcattgcgcaacgaagcgtccgtttcgactttcacagcagtcgatcctccaaccaat
gtgaagctggaactcaacaacaacacatgtgtggcgacctggtccagaaaaggtggacgc
gtcacaggtttcgttgtaaaggccaagggttattacgatgatgatgttcatgagagcaga
gccgaatggccgctttccggtgattggagcacctgcgatacggtaagcgtgcaacagtac
ttcatcgacacctcacatctcagcgacccagcaatcgctaccgataataccgtcggcaac
aaaaagccagcggaaatcacactgccatcctcattgacgtgggatacacagaacgccaac
atcattcatgtcaatggcggtagttgggaggcccacgggcgaagtgtcaaaggccagatc
gtcatcactccggcaggggaaagctcgcatacctacgattggccagctaacggcacactg
gatgtttccgacatcaccagtccttccggtaccagatgcgattgggaggttcgcgtgatc
accactgccggggaaccagaaatcaatgcgaccaagaaaagctctgatcccgtgaccgga
gtccgatacgaggagaaaacccccgatccggaaccgggaccaacccctgataatggagag
acgcaatcctcgatagacaccaatgcttcagccatctcattacgaacagggttggcagga
aaacaggcgcgaggcatctcattcaccgtcaaataa
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integrated database retrieval system
