Bifidobacterium pseudocatenulatum: BBPC_1559
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Entry
BBPC_1559 CDS
T03932
Name
(GenBank) ABC transporter ATP-binding component
KO
K16014
ATP-binding cassette, subfamily C, bacterial CydCD
Organism
bpsc
Bifidobacterium pseudocatenulatum
Pathway
bpsc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bpsc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BBPC_1559
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bpsc02000
]
BBPC_1559
Transporters [BR:
bpsc02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
BBPC_1559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_29
Rad17
AAA_22
AAA_16
AAA_23
RsgA_GTPase
AAA_33
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BAR04237
LinkDB
All DBs
Position
complement(1903560..1907657)
Genome browser
AA seq
1365 aa
AA seq
DB search
MFDKRLFSLAPGVGRLVAAKVLCQWVGLLANVVFVVTVVVMLSPALAVVESAFDPMFSMG
DSGLISRLFIGFGYGGFSAETYVGCVLAIVVCAVLRFLMMRAAAYFGAEAAERVKLALRE
QLFNKMLAIGPSYSQHISTADVVQSAGEGIEQIQSFFELFLPQLFYAILAPVTLFFIVAP
INMPTAVTLLVCAPLIVLIVGMVAMRAARVFKKYWGKYTDMGSVFLDNVQGLETLKTFDA
DAHAAKKMGEQAEQFRVMTMNVLQIQLRSLTAMDVVAYGGAAAGVGVSIWQYASGAALPL
AGVLLIVLLSADFFIPLRQLGSFFHVAMNGMTSTKRIFALLDTPIPAHGMQEMPEFGASD
NGVDVCFDDVSFRYVDVNTDAAAAVSVAADTAVTADMETGKTGQIGGKSGVVGAGKTGMS
KDDDGSVVALHGVSFTARRGQVTAIVGPSGSGKSTAVELLSGNLSGYEGCMWLQSGNTGN
NSTQRYQINDLSIESLTREIAIVAAQSHLFAGTLRDNLLMAKPDATESELWQALEAAHIS
DFVRAQSQELDLAIEQGASNLSGGQKQRIAIARALLREPAVYIFDEATSSVDVESETLIL
QTIRALADRGKTVIMVTHRMANAADADHVVVFEHGRVAEQGTHAELMRANGTYAKLFHAQ
QTVENIGLRNNATHSTSASHALKASDSAESVTQRAEMGLQVSDSAETDAQGAKTGVRMSD
SAESDAKTIPTSRLIARLLKEVGPQRKYMIVACVCGTLGHLAATFLPVFGIAAAFAAVGS
PVWNLSVLAALAAMAVCALIRGGMRYAEQFMNHNVAFRLLALFRAKAFAALRRLAPAKLA
GKGKGDLIALVTTDVELLEIFFAHTISPVVIAIVTTVVYALALLTLSPPLAATLIIAHLI
IGVILPKLFASAVRGIGPELRKESSALDDEMLDDMRGIGEIIRFGQGDARLASIQRRTRS
LWVKRVRLSVKNGDFAGFGAVLVMLFTAIAAFLAMTLCTAVSTAADMSEGLMWMGSVGSN
APALVAAFVLLASSFGPTLALSALPANLTQTFASARRLFALMDEAPAVVEQGSERPEYQG
MTMRDVTFGYGSGARISVERTPNGRSEHATGMSPARPAEAQSSGEQGAGIASQPVLDHVS
LDVSRQGILGIQGPSGRGKSTMLKLLMRYWDPDSGTISLSDVPLPQVDAGWRRRVQTMMG
QETYLFDGTIRENLAIACNDADFSDSDSNSGSNFCSNSSSNAGGNSADSSDSDLAHDIPD
SVLREALAKASALELVDALPNGLDTRVGELGGRLSEGEKQRIGLARMFLRDADLVLFDEP
TSRLDAYNESVILGSINDLAERGSAVVLVSHRDSTMRIADRILRM
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaagaggctgttttccctcgctcccggcgtggggcggttggttgcggcgaaa
gtgctctgccaatgggtcggactgctggccaacgtcgtgttcgtggtgacggtggtggtc
atgctttcgccggcgcttgccgtggtggaatcggcgttcgaccccatgttctccatgggt
gatagtggcctgatttcccgcctgttcatcggctttggctacggcggattcagtgcggaa
acatacgtcggatgcgtgctggcgatcgtggtctgtgcggtactgcgttttctgatgatg
cgcgcagcggcctatttcggcgcggaagcggctgagcgtgtcaaactcgcgttacgtgaa
cagctttttaataaaatgcttgcgatcggaccatcatattcgcaacatatcagcactgcc
gacgtggtgcaatctgccggtgaaggcatcgaacaaatccaaagcttcttcgaattattc
ctaccgcaactgttttatgcgattctcgcaccggtaacattattttttatagttgcgccg
attaatatgccgacggctgttacattgcttgtatgcgcgcctttgattgtattgattgtt
ggcatggtcgcaatgcgcgcagcccgagtattcaaaaaatattggggaaaatacaccgac
atgggatctgtgtttcttgacaatgtacaaggtcttgaaacgctgaaaacttttgacgcg
gatgcgcatgccgccaagaaaatgggcgagcaagcggaacaattccgcgtaatgaccatg
aatgttctgcaaattcagctgcgctcgctcaccgccatggacgtcgtcgcatacgggggt
gccgcggccggcgtgggcgtatcgatctggcagtatgcgagtggtgccgcattgccgctt
gccggcgtgctgctgatagtgcttctttccgcggatttcttcattccgctgcgccaattg
gggtcgttcttccatgttgcgatgaacggcatgacttcgaccaagcgtattttcgcattg
cttgatacgccgattcctgcgcatgggatgcaggaaatgccggaattcggcgcttctgat
aacggtgtggacgtgtgctttgatgacgtgtcgttccgatatgtggacgtgaatacggat
gctgcggcggctgtgagtgtggctgcggatacggctgtgacggcggatatggaaactgga
aaaactggacaaatcgggggaaagtccggtgtggttggtgctggaaaaacaggcatgtcg
aaagatgatgatggttcggtcgtcgcattgcatggcgtctctttcactgcgcggcgcggg
caggtgaccgccatcgtcggtccgtccggatccggcaaatccaccgccgtcgaactgctc
tccggaaatctttccggatatgaaggatgtatgtggctgcaatccggaaacacaggaaac
aactcgacgcaacggtaccaaatcaacgatctttccatcgaatcccttacgagggaaatc
gccatagtggcggcgcaaagccacctttttgcaggaacgttgcgtgacaatctgctgatg
gccaagccggatgccaccgaaagcgaactgtggcaagcgctggaagcggcgcatatcagc
gatttcgtgcgtgcgcaatcgcaagaacttgacctggccatcgaacagggcgcaagcaac
ctgtcgggagggcagaagcagcgcatcgccattgcgcgcgcattgctgcgggagcctgcc
gtctacattttcgacgaagccaccagcagcgtcgatgtggaaagcgaaaccctgattctg
caaaccattcgggcgcttgcggatcggggcaaaaccgtgatcatggtgacgcaccgcatg
gcgaatgcagccgacgccgaccatgtggtggtattcgaacacgggcgcgtggcggaacaa
ggcacgcatgcggaactcatgcgtgccaacggaacatacgccaaactgttccacgcccaa
caaaccgtggaaaacataggtctacgcaataacgcaacccattccacctctgcatcccac
gcacttaaagcgtccgattctgcagaatcagtcacgcagcgtgcggaaatgggtctccaa
gtgtccgattctgcagaaacggacgcacagggtgcgaaaacgggcgttcggatgtccgat
tcggcagaatcggacgcgaagacaatacccacgtctcgccttattgcgcgcctgttgaag
gaagttgggccgcagcgcaagtacatgatcgtcgcgtgcgtctgcggcacgctcggccat
ctcgccgccactttcctgccggtgttcggcatcgcggcggccttcgctgcagtcggctcg
ccggtctggaacctcagcgttctcgcggcgctcgcagccatggccgtatgcgcgttgatc
cgcggcggcatgcgttacgccgaacagttcatgaaccataacgtggcgttccgtctgctt
gcgctattccgtgcgaaagccttcgcggccctgcgccgtctcgcccccgccaagcttgca
ggcaaaggcaaaggcgacctgatcgcactggtcaccaccgacgtggaactgctggaaatc
ttcttcgcacacaccatcagcccggtcgtcatcgccatcgtgactaccgtcgtctacgcg
ctcgcgctactcaccctcagtccgcccctcgcggcgacgctcatcatcgcgcacctcatt
atcggcgtcatactgccgaaactttttgcatccgcggtgcgcggcatcggtccggaactg
cgcaaggagtcgtccgccctcgatgacgaaatgcttgacgatatgcgtggcatcggcgaa
atcatccgcttcggccaaggcgatgcccggcttgcgtccattcagcgtcgcacgcgctcg
ctgtgggtcaaacgtgtgcgtctgagcgtgaaaaatggcgattttgcaggatttggcgcg
gtattggtgatgctgttcacggcgattgcggctttccttgcgatgacgttgtgcactgcg
gtttccactgccgccgatatgtcggaaggcctgatgtggatgggttccgtgggatcgaac
gccccagcgttggttgcggctttcgtgctgctcgccagctcgtttgggccgacgcttgcg
ttgagtgcgttgccggcgaatctgacgcaaacgtttgcttcggcacgccgcctgttcgcg
ttgatggatgaggctcccgctgtggtcgagcaggggagcgaacgcccggaatatcagggc
atgacaatgcgcgatgtcacattcggctatggatccggcgcccgtatttccgtcgaacgc
acgccaaacgggcggtcggagcatgcgactggcatgagtccggcacgccccgcggaagcg
caatcctccggcgaacaaggtgccggcatcgcctcgcaaccggtgctcgaccatgtttca
ctcgatgtttcacggcagggcattctcggtattcaaggcccgtccgggcgtggaaaatca
acgatgttgaaactgctgatgcgctactgggatccggattccggcacgatttcgctgtcg
gatgttccattgccgcaggttgacgccggatggcgtcggcgcgtgcagacgatgatgggg
caggagacgtatctgttcgacggaacgattcgcgaaaatctcgctattgcctgcaatgac
gccgatttttcggattctgacagtaattctggcagtaatttctgtagtaattccagcagt
aatgctggtggtaattccgctgattcctccgattcggatctcgcgcacgacattcccgat
tccgtattgcgcgaagccctcgccaaggcgtccgcgctcgaactggtcgatgcgctgccg
aacggcttggatacgcgggtcggcgagctgggtggccgcctttcggagggtgagaagcaa
cgcatcggattggcccgcatgttccttcgcgacgccgatttggtgctgttcgacgagccg
acgagccgtcttgacgcctataacgagtcggtgattctcgggtcgatcaatgatcttgcc
gagcgggggagcgccgtcgtgctggtgtcgcaccgcgattccaccatgcgcatcgctgat
cgcatactgcgtatgtag
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