Bifidobacterium pseudocatenulatum: BBPC_1561
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Entry
BBPC_1561 CDS
T03932
Name
(GenBank) putative long-chain-fatty acid CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bpsc
Bifidobacterium pseudocatenulatum
Pathway
bpsc00061
Fatty acid biosynthesis
bpsc00071
Fatty acid degradation
bpsc01100
Metabolic pathways
bpsc01212
Fatty acid metabolism
bpsc02024
Quorum sensing
bpsc04146
Peroxisome
Module
bpsc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bpsc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BBPC_1561
00071 Fatty acid degradation
BBPC_1561
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BBPC_1561
09145 Cellular community - prokaryotes
02024 Quorum sensing
BBPC_1561
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bpsc01004
]
BBPC_1561
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bpsc04147
]
BBPC_1561
Enzymes [BR:
bpsc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BBPC_1561
Lipid biosynthesis proteins [BR:
bpsc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BBPC_1561
Exosome [BR:
bpsc04147
]
Exosomal proteins
Exosomal proteins of breast milk
BBPC_1561
Exosomal proteins of breast cancer cells
BBPC_1561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BAR04239
LinkDB
All DBs
Position
1908253..1910151
Genome browser
AA seq
632 aa
AA seq
DB search
MYRSRTHHKQKYAETTQKPRERERFMLTEYTTPGESVEVRDDESIYSLLTGRIARTGEDT
VIAEHKTAPGQWTKVTTGEFHNAVLAAAKGLIAFGINKGDAVTIFSTTRYEWGVLDFALA
AIGAVNVPIYDTDSAAQAERILNDSDVKLAIADNRERFDRLDSVIDRCPSLKHILMLDSN
AMGALEGLGVTVSDEELEARIDSVHADDLATIVYTSGSTGAPKGAELSHRNFISITRAGS
LALHEIVLEDHPRLLLFLPLAHCFARFIQYASIASDDGVVGYLPDTKTLLPDLRSFEPTY
LLGVPRVFEKVYNAASRKAGTGWKGRLFLKAAEAARDWSRMQQAGERPTAKQIAQHLSYE
ASVYRTVRSALGPRIRYVACGGAPLDVSLAHFFNGIGLPMIQGYGMTETAAPFAATRVTD
NVIGTVGQPAPGSSVRISDDGELQVKGPNVFRGYHNLPEKTAEAFTEDGWLKTGDLASID
DEGRITITGRKKDIIITAGGKNVSPIPMEQEIVKCPIVEHVVVVGDNRPFIGALITLDPE
GLEAWLPSIGLSADTPLDRVAATAAVHDEIQKYVDKANATVSRAESVRKFVVLDTQFTQE
NKCLTPSLKVVRPAVNRVFAQVIDQQLYSGKR
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
ttgtatcgctcccgcacgcatcacaagcagaaatacgcggaaacaacgcaaaaaccgcga
gaaagagaacgcttcatgctcaccgagtacaccaccccgggcgaatccgttgaggtgcgc
gacgacgaatccatctattccctgcttactggacgcatagcgcgcactggcgaagatacc
gtgatcgcggaacacaaaaccgcccccggccaatggacgaaggtcactaccggcgaattc
cacaatgccgtgctcgccgccgcaaaaggcctcatcgcattcggcatcaacaagggcgat
gccgtcaccatcttctccaccacccgctacgagtggggcgtgctcgacttcgcactggcc
gccatcggcgcggtgaacgtgccgatctacgacactgattccgcggcgcaggccgagcgt
atcctcaacgattcggatgtgaaactggccatcgccgacaatcgcgagcgcttcgaccgt
ctcgactccgtaatcgaccgctgcccgtctctcaagcacattctgatgctcgattccaac
gccatgggcgcgttggaaggcttgggcgtcaccgtgtccgacgaggagctggaagcgcgc
atcgattcggtgcatgcagacgatctggccaccatcgtgtacacgtccggttcgacggga
gctccaaagggtgccgagctttcgcaccgcaatttcatatcgatcacgcgcgcaggcagt
ctggcgttgcatgagatcgttctcgaagatcatccgcgactgcttctcttcctgccgctc
gcccactgtttcgcacggttcatccagtacgcgtcgattgcttccgacgacggcgtggtt
ggttatctgccggacacaaagacgctgctgcccgatttgcgttccttcgaaccgacatat
ctgctgggcgtaccacgagtgttcgagaaggtgtataacgcggcctcccgcaaggccggc
acgggttggaagggacgcctgttcctcaaggctgccgaagccgcacgcgattggtcgcgc
atgcagcaggccggcgaacgcccgaccgccaagcagatcgcgcagcatctttcgtatgag
gcttccgtataccgtaccgtgcgtagcgctctcggcccgcgcatccgctacgtggcatgc
ggtggtgctcctctggacgtgtctctggcgcatttcttcaacggtatcggcctgccgatg
attcagggttacggtatgacggaaaccgctgcgccgttcgccgcgacccgcgtcaccgac
aatgtgatcggcactgtcggccaaccggctccgggatcgtctgtgcgcatttccgatgat
ggcgaacttcaggtgaagggcccgaacgtgttcaggggctaccacaacctgcctgagaag
acggcggaagcgttcaccgaggatgggtggctgaaaacgggtgatttggcgtcgattgac
gacgagggacgtattacgatcaccggccgtaagaaggacatcatcatcaccgccggcggc
aagaacgtttctccgattccgatggagcaggagattgtgaaatgtccgattgtggagcat
gtggtagttgtcggcgacaatcgtccgttcatcggtgcgctgatcacgttggatccggaa
ggattggaggcttggctgccttccattggactgtctgccgatacgccgttggatcgcgtg
gctgcgaccgccgccgttcacgacgaaatccagaagtacgtcgacaaggcgaacgcgacc
gtttcccgcgccgaatccgtacgtaagttcgtagtgctggatacccagttcacgcaggaa
aacaagtgcctgaccccgtcgctgaaagtggtgcgtccggcagtgaaccgcgtgttcgca
caggtgatcgatcagcagctgtactccggcaagcgctga
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