Bifidobacterium pseudocatenulatum: BBPC_1562
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Entry
BBPC_1562 CDS
T03932
Name
(GenBank) L-arabinose isomerase
KO
K01804
L-arabinose isomerase [EC:
5.3.1.4
]
Organism
bpsc
Bifidobacterium pseudocatenulatum
Pathway
bpsc00040
Pentose and glucuronate interconversions
bpsc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bpsc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BBPC_1562
Enzymes [BR:
bpsc01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.4 L-arabinose isomerase
BBPC_1562
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AraA_N
Arabinose_Iso_C
AraA_central
DUF2895
Motif
Other DBs
NCBI-ProteinID:
BAR04240
UniProt:
C0BV07
LinkDB
All DBs
Position
complement(1910466..1911983)
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AA seq
505 aa
AA seq
DB search
MAMENPFEGKEVWFGVGSQDLYGEEALRQVAEQSGEIVDALNATGKIPVKVVLKPTLKSS
DGVKAFMVEASANPNVIGVITWCHTFSPAKMWIRGLEVLTKPLLQLNTQHHFEIPWETID
MDFMNLNQAAHGDREFGYILTRLGINRKIVVGHYTDPAVAEEIGTWARACAGWDASNNMK
VMRWGDNMRNVAVTEGDKTEAERVFGASINTWAVNELVAAYEAVKDDQVKSIIEDYKVKY
DVDPALLDAKYDSLFIAAKEEAAMVNMMRANGCTAGVDNFEDLGALPQLPGVGPQRFPSE
YGFGFSAEGDWKTAVLVRIGAVMGYGLEGGASLMEDYSYNFTPGNEMIMGSHMLEVSPSV
GTIAKPKLEIHPLGIGGKADPVRLVFTVAPKKDAVVVSMSDVRERFRLTMNLVDVVEPLG
ELKQLPCARGLWKPQPDLKTSAECWLRSGASHHTCMTTSVGREAWEDFARIAGVELATID
ANTKAAEFERDLEISEMYHRLNNRH
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggaaaacccgtttgaaggcaaggaagtctggttcggcgtcggatcccaggat
ctgtacggcgaagaagcgctgcgtcaggtggccgagcagtccggcgaaatcgtcgacgcg
ctcaacgcaaccggcaagattccggtcaaggtggtgcttaagccgaccctgaagtcctcc
gacggcgtcaaggccttcatggtcgaagcctccgccaacccgaacgtcatcggcgtgatc
acctggtgccacaccttctccccggccaagatgtggatccgcggcctcgaagtgctcacc
aagccgctgctgcagctcaacacgcagcaccacttcgaaatcccgtgggaaaccatcgac
atggacttcatgaacctgaaccaggccgcacacggcgaccgtgagttcggttacatcctg
acccgtctgggcatcaaccgcaagatcgtggtcggccactacaccgatccggccgttgcc
gaagaaatcggcacctgggcacgcgcctgcgccggctgggatgcttccaacaacatgaag
gtcatgcgttggggcgacaacatgcgcaacgtggccgtcaccgaaggcgacaagaccgaa
gccgagcgcgtgttcggcgcatccatcaacacttgggccgtcaacgagctcgtcgcagcc
tacgaagccgtcaaggacgatcaggtcaagagcatcatcgaagactacaaggttaagtac
gacgttgatccggctctgctcgacgccaagtacgattccctgttcatcgcggccaaggaa
gaagccgccatggtcaacatgatgcgcgccaatggctgcaccgccggcgttgacaacttc
gaagacttgggtgctctcccgcagctgccgggcgttggcccgcagcgcttcccgtccgag
tacggcttcggcttctccgccgaaggcgactggaagaccgcagtgctcgtgcgcatcggc
gcagtgatgggctacggcctcgaaggtggcgcttccctcatggaagactactcctacaac
ttcaccccgggcaacgagatgatcatgggctcccacatgctcgaagtctccccgtccgtc
ggcaccatcgccaagccgaagctggaaatccacccgctcggcatcggtggcaaggccgat
ccggtgcgcctggtcttcactgtcgccccgaagaaggacgccgtcgtcgtgtccatgtct
gacgtgcgcgaacgtttccgcctgaccatgaacctggtcgacgtggtcgagccgctcgga
gagctcaagcagttgccgtgcgcccgtggcctgtggaagccgcagccggacctcaagacc
tccgccgagtgctggctgcgttccggcgcctcccaccacacctgcatgaccacctccgtc
ggtcgcgaggcttgggaagacttcgcccgcatcgccggtgtcgaactcgccaccatcgac
gcgaacaccaaggccgcagaattcgagcgcgaccttgagatctccgaaatgtaccaccgc
ctcaacaaccgtcactaa
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