Bifidobacterium pseudocatenulatum: BBPC_1569
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Entry
BBPC_1569 CDS
T03932
Name
(GenBank) putative diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bpsc
Bifidobacterium pseudocatenulatum
Pathway
bpsc00300
Lysine biosynthesis
bpsc00470
D-Amino acid metabolism
bpsc01100
Metabolic pathways
bpsc01110
Biosynthesis of secondary metabolites
bpsc01120
Microbial metabolism in diverse environments
bpsc01230
Biosynthesis of amino acids
Module
bpsc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bpsc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BBPC_1569
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BBPC_1569
Enzymes [BR:
bpsc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BBPC_1569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAR04247
LinkDB
All DBs
Position
complement(1920145..1921725)
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AA seq
526 aa
AA seq
DB search
MAVTPIWPAGSNVNEQGEITFHGRTAESLLNEFGSPLYVIDTDDVRARAAKFVKSAANAF
NNTVTHVSFAGKALLSKEICRIVTESGMLIDTCTMGEMRIALAAGVPGRRLVLHGNNKSD
AEIELAITEGFAKIVVDEPNEPARIAEIAKRLGKRARVMLRVTSGIHAGGHEFVSTAHED
QKFGVALLPVGADASKLNVLDDLADVTPAGSNARLGESEATPGESAERQLQYDIKYPYDM
SHEKVSEGDRKLAEAMTMVADGPALAVLKEIYRHQDVLELVGVHSHIGSNIHDADAFIQA
AKRMMLLRKTFYATDAYTLPEVDLGGGYSVAYTDGEDSMDLDTELARLADAVTTVNRALG
MPAPVISFEPGRWTVAPTGVTLYRVGTVKPVQLAGTAKDKAGNPVTERVYVSVDGGMSDN
IRPALYGSDYTARIANREGSSETKLCRVVGMHCESGDIIVNEVRLPADIQRGDVLAVPVT
GAYGRTMASNYNQALIPAVVAVSEQDAHVMIRRQTVDDLLDWDVSE
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcacccccatctggccggccggctccaacgtgaacgagcaaggtgaaatcacg
ttccatggccgcactgccgaaagcctgctgaacgaatttggttcgccgctctacgtcatc
gacaccgatgacgtgcgagcccgcgccgccaaattcgtcaaatccgcggcaaatgcgttc
aacaacaccgtaacccacgtcagcttcgccggaaaagcactgctttccaaggaaatctgc
cgtatcgtcaccgaatccggcatgctgatcgacacctgcaccatgggcgagatgcgcatc
gcgctcgccgcgggcgttcccggacggcgactcgtgctgcacggcaacaacaagtccgat
gcggaaatcgaactcgccattaccgaaggcttcgccaaaatcgtggtggacgagccgaac
gagccggcccgcatcgccgaaatcgccaagcgtctcggcaagcgcgctcgcgtgatgttg
cgtgttacgtccggcattcatgcgggcggccacgaattcgtgtctaccgcgcatgaggac
cagaagttcggtgtcgccttgctgccggttggtgccgatgcaagcaagctgaacgtgctc
gacgatttggctgacgtgacccccgcagggtcgaacgcacgcctaggcgaaagcgaagcc
actccgggcgaaagcgcagaacgccaactgcagtacgacatcaaatacccgtatgacatg
agccacgagaaggtttccgaaggcgaccgcaaactcgccgaagccatgaccatggtggct
gatggccccgcgctcgccgtattgaaggagatctaccgccatcaggacgtgctcgaactg
gtcggtgtgcattcgcatatcggatcgaacattcacgatgcggacgcctttatccaggcc
gcgaagcgcatgatgctgctgcgcaagaccttctacgccaccgacgcatacaccctgccg
gaggtcgacttgggcggcggctattccgtggcctacaccgatggcgaggattccatggat
ctcgatacggaacttgcccgccttgccgatgcggtcaccaccgtgaaccgtgcgctcggc
atgcccgctccggtcatctcgttcgagccgggccgttggacggtcgccccgaccggcgtc
accctgtatcgtgtgggcacggtcaagccggtgcagcttgccggaaccgcgaaagacaag
gctggcaatccggttacggaacgcgtgtacgtgtctgtcgacggcggcatgagcgacaat
attcgtccggcattgtatggatcggattacactgcgagaatcgccaatcgtgagggttcc
agcgaaaccaagctgtgccgtgtggtcggcatgcactgcgaatcgggcgatatcatcgtc
aacgaggtgcgtcttcctgccgatattcagcgtggtgacgtgctggcggtgcctgttacg
ggtgcatacggtcgcacgatggccagcaactacaatcaggcgctgattcctgcggttgtt
gccgtatccgagcaagacgcgcatgtgatgattcgccgtcagacggtcgatgatctgctg
gattgggatgtgagcgaatag
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