Bifidobacterium pseudocatenulatum: BBPC_1616
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Entry
BBPC_1616 CDS
T03932
Name
(GenBank) Clp protease
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
bpsc
Bifidobacterium pseudocatenulatum
Brite
KEGG Orthology (KO) [BR:
bpsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
bpsc03110
]
BBPC_1616
Chaperones and folding catalysts [BR:
bpsc03110
]
Heat shock proteins
HSP100
BBPC_1616
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
NBD_SMAX1
TniB
nSTAND3
ATPase_2
AAA_7
AAA_14
Mg_chelatase
IstB_IS21
bpMoxR
AAA_3
AAA_24
NACHT
DNA_pol3_delta2
T2SSE
Zeta_toxin
DUF6689
ResIII
AAA_19
AAA_23
Flu_NP
DUF6435
LUC7
Motif
Other DBs
NCBI-ProteinID:
BAR04294
LinkDB
All DBs
Position
complement(1986322..1989120)
Genome browser
AA seq
932 aa
AA seq
DB search
MVVKSVEHIRQRHMRRRDRAKNGRSARTMEDDMEQKFTTMAQEAISDAVQNASAAGNAQV
ETLHLLDALLRQENGVIRGLIEAAGGNAQNISAAVHQAQDALPSVSGSTTAQPQVSRQLS
AVLAQAGKEMQQMGDEYVSTEHLLIAIAAAKPNQSAQIMEQYGVTADALRKAVPTIRGGA
KVTSPDAEGSYKALEKYSTDLTAAAKEGKLDPVIGRDQEIRRVIQILSRRTKNNPVLIGE
PGVGKTAVVEGLAQRIVAGDVPTTLQNKKLISLDLGSMVAGSKYRGEFEERLKSVLQEIK
NADGQIITFIDEIHTIVGAGAAEGSMDAGNMLKPMLARGELRLIGATTLDEYRENIEKDP
ALERRFQQVFVGEPSVEDTIAILRGIAPKYEAHHKVTIGDDALVAAATLSNRYISGRQLP
DKAIDLVDEAASHLRMELDSSPEEIDELQRQVDRLKMEKSYLLGNPKDDADAQKAENELD
ESAKERLDDLNKEIADKSEKLNGLKARWDAEKNGHNRIGDLRKKLDELRTQAERYEREGD
LAKSSAINYGEIPAIQKEIAQAEQNEAAAKNSAAGGADGGLGGDIPMVPDRVDADSVAEI
VSDWTGIPVGRLMQGENEKLLTMEDYLGKRVIGQKEAIQAVSDAVRRSRAGISDPNRPTG
SFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRLIGAAPGYIGYEEG
GQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDDGRLTDGQGRTVDFKNTILIMTSN
LGSQFLVNTELDDEAKKKAVMDAVHMQFKPEFINRLDELVMFHPLTREELGGIVDIQVAQ
VSARLADRRIKLDVTDSARDWLANTGYDPAYGARPLRRLVQTEVGDQLARMLLAGEVHDG
DTVLVDQTGGDHLELSSWAPGQIDDDFSAEAK
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgaagtcggttgagcatatcagacaacgacatatgcgtcgacgcgaccgtgcg
aaaaacggacgatcggcgcgaaccatggaggatgatatggaacagaagttcaccacaatg
gcgcaggaagccatttccgacgccgtacagaacgcgtcggcagcaggcaacgcgcaagtc
gaaaccctgcacctgcttgacgcgctgctgcgccaggaaaacggcgtgatccgcggtctg
atcgaagccgcgggcggcaacgcgcagaacatcagcgccgccgtgcaccaagcgcaggac
gcgctgccaagcgtcagcggatcgaccaccgcgcaaccgcaagtcagcaggcaactatcc
gcagtacttgcgcaagccggcaaggaaatgcagcagatgggcgacgaatacgtatccacc
gaacatctgctcatcgccatcgcggcggcaaagccgaatcagagcgcgcaaatcatggaa
caatacggcgtgaccgccgacgcgctacgcaaagccgtgccaacgatccgaggaggcgcg
aaagtgaccagtcccgacgccgaaggctcctacaaagccctcgaaaagtattcgaccgac
ctgacggcagccgcgaaagaaggcaagctcgaccccgtgatcggccgcgatcaggaaatc
cgccgagtcatccagatcctgagccgccgcaccaagaacaatccggtgctgatcggcgag
cctggcgtgggcaaaaccgccgtggtggaaggccttgcgcagcgtatcgtcgccggcgat
gtgccgaccaccctgcaaaacaagaagctcatctcgcttgatctgggctccatggtggca
ggttcgaaataccgtggcgagttcgaggaacgcctgaagagcgtgctgcaggaaatcaag
aacgcagacgggcagatcatcacgttcatcgatgagatccataccatcgtcggcgcgggc
gcggccgaaggatccatggacgcgggcaacatgctcaaacccatgctcgcgcgaggcgaa
ctgcgcctgatcggtgccaccacactcgacgaataccgtgagaacatcgaaaaggatccg
gcattggaacgccgtttccagcaggtgttcgtaggagagccgagcgtggaagacaccatc
gccatcctgcgtggcatcgcaccgaaatacgaagcccaccacaaggtgaccatcggagac
gatgcgctcgtggccgcggcgacgctgtcgaaccggtatatttccggccgtcagctgccg
gacaaagccatcgatctggttgacgaggccgcatcgcacctgcgcatggaactcgactcc
tcgcctgaggaaatcgacgaactgcagcgtcaggtcgaccgtctcaagatggaaaaatcg
tacctgcttggcaatccgaaagacgatgccgacgcgcagaaagcggaaaacgagcttgat
gaaagcgccaaggaacgtctcgacgacctcaacaaggaaatcgccgacaaaagcgagaaa
ctcaacggtctgaaagcacgctgggacgccgaaaagaacgggcacaaccgcatcggcgac
ctgcgcaagaagctcgacgaactacgcacccaagccgaacggtatgaacgcgaaggcgat
ctggcgaaatcctccgccatcaactatggcgaaattccggccatccagaaggagatcgcg
caagccgaacaaaacgaggcggcggccaagaacagtgcggcaggcggtgctgacggtggc
ttgggtggcgatattccgatggtgccggaccgcgttgacgccgactccgtggccgaaatc
gtgtccgactggacgggcattcccgtcggacgcctcatgcaaggcgaaaacgagaagctg
ctgaccatggaagactatctcggcaaacgtgtgatcggccagaaggaagccattcaagcg
gtttccgatgcggtacgtcgttcgcgtgcgggcatttccgacccgaaccgcccaaccggc
tcgttcctgttcctcggcccgaccggcgtgggcaagaccgagctcgccaaggcgctcgcc
gacttcctgttcgacgatgaaaaggccatggtgcgcattgacatgagcgagtacatggag
aaggcctccgtgtctcgtctaatcggtgctgcgccaggctacatcggctatgaggagggt
ggccagctgactgaagccgtgcgtcgccgcccatattcggtggtgctgttcgatgaggtt
gaaaaggccaatcctgaagtattcgacgtgctgttgcaggtgctcgacgacggccgtttg
accgacgggcagggcaggaccgtggacttcaagaacacgattctgatcatgacctccaac
cttggctcgcagttcctggtgaacaccgaactggatgacgaagccaagaagaaggccgtg
atggacgccgtgcatatgcagttcaagccggaattcatcaaccgcttggatgaactggtt
atgttccacccgcttacgcgcgaagagctcggcggcatcgtggacattcaggtggcgcag
gtttcggcccgcttggcggatcgccgcatcaagctggatgttaccgattcggcgcgcgat
tggctcgccaacaccggttacgacccggcgtatggcgctcgcccgctgcgtcgtttggta
caaaccgaagtcggcgaccagttggcgcgcatgctgctggccggcgaagtgcacgacggc
gacaccgtgcttgtggatcagaccggcggcgaccatttggagctctcctcgtgggcgccg
gggcagattgacgacgatttttcggcagaggctaagtga
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