Burkholderia pseudomallei MSHR520: BBX_2856
Help
Entry
BBX_2856 CDS
T03163
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bpsd
Burkholderia pseudomallei MSHR520
Pathway
bpsd03030
DNA replication
bpsd03430
Mismatch repair
bpsd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBX_2856 (dnaE)
03430 Mismatch repair
BBX_2856 (dnaE)
03440 Homologous recombination
BBX_2856 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpsd03032
]
BBX_2856 (dnaE)
03400 DNA repair and recombination proteins [BR:
bpsd03400
]
BBX_2856 (dnaE)
Enzymes [BR:
bpsd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBX_2856 (dnaE)
DNA replication proteins [BR:
bpsd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BBX_2856 (dnaE)
DNA repair and recombination proteins [BR:
bpsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BBX_2856 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
AHK67193
LinkDB
All DBs
Position
1:complement(3228305..3231766)
Genome browser
AA seq
1153 aa
AA seq
DB search
MRLDDIVKSAAEDGQGALALTDLGNAFGLVRFYKEARDAGIKPIAGCDVWITNHDDRDKP
SRLLLLVKDKRGYLNLCELLSKAWLTNQYRGRAELDASWLEGELAEGLLALSGAQQGDIG
LALAAGNEAAARRHAQRWARVFPGGFYIELQRYGQPGGEAYIQQAVTIAAELKLPVVATH
PLQYMTADDFTAHEARVCISEGDILANPRRQKRFTTEQFFRTQGDMAALFADLPSALANT
VEIAKRCNLTLELGKPKLPRFPTPDGMSLDDYLVQLSQEGLDKRLVQLYPDEAEREAQRG
KYNQRLDFECGTIKKMGFPGYFLIVADFINWAKNNGVPVGPGRGSGAGSLVAYSLGITDL
DPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQYVKEKYGADAVSQIATFGTMAAK
AAVRDIGRVLDLGYMFTDGVAKLIPFKPGKHVTIADAMKEEPLLQERYDNEDEVHQLLDL
AQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGDEGGVVSQYDKDDVEAVGLVKFDFL
GLTTLTILDWAERYIRRLDPSKENWSLAQVPLDDPTSFQILKKANTVAVFQLESRGMQGM
LKDAQPDRFEDIIALVSLYRPGPMDLIPSFCARKHGREKVDYPDPRVEPVLKETYGIMVY
QEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAKHREIFAEGAAKNGLTREKSDEIFD
LMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEFMAANMTLAMDDTDKVKILFDDCLV
NGLAVLPPDINRSNYRFEPVAEADGKRSRTIRYGLGAIKGSGQNAIEEILRAREEKPFAD
LFDFCERIDRRVVNRRTIEAMIRAGAFDSLHENRAQLLASVPLAMEAAEQAAANALQAGL
FDIGGVPAHQHALVDEPAWDDKRRLQEEKGALGFYLSGHLFDAYRDEVRRFVRQKLGELK
EGRDKVVAGVIASLRTQMTQRGKMVIALLDDGTGQCEVTVFNEQFDANRALFKEDELLIV
QGQARNDAFTGGIRFTAESVMDLERARSRYAQAVRMTMNGNADAAALRRVLEAHVAKPDE
TPPAAAPAPRGGRDGGRRAQAAIPNGLAVRIAYSNARAQGEMRLGDAWRVKPSDALLADL
RAAFGGSVVEIVY
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctcgacgatatcgtcaagtcggcggccgaagacggtcagggcgcgcttgcactg
accgacctcggcaacgcgttcggtctcgtccgtttctacaaggaagcccgcgatgcgggc
atcaagccgatcgccggctgcgatgtctggatcaccaaccacgacgatcgcgacaagccg
tcgcggctgctgctgctcgtcaaggacaagcgcggctacctgaacctctgcgagctgctg
tcgaaggcgtggctcacgaaccaataccgcggccgcgcggagctcgacgcgagctggctc
gaaggcgagctcgccgaagggctgctcgcgctgtcaggcgcgcagcagggcgacatcggc
ctcgcgctcgcggcgggcaacgaggcggccgcgcgccgccacgcgcagcgctgggcgcgg
gtgttcccgggcggtttctatatcgaattgcagcgctacggccagccgggcggggaagcg
tacatccagcaggcggtgacgatcgcggcggagctgaagctgcccgtcgtcgcgacacat
ccgctgcagtacatgacggccgacgatttcaccgcgcacgaggcgcgcgtgtgcatctcg
gaaggcgacatcctcgcgaatccgcgccgccagaaacgcttcacgaccgagcagttcttc
cgcacgcagggcgacatggccgcgctgttcgccgatctgccctcggcgctcgcgaacacg
gtcgagatcgccaagcgctgcaacctgacgctcgagctcggcaagccgaagctgccgcgg
ttcccgacgcccgacggcatgtcgctcgacgactacctcgtgcagttgtcgcaggaaggg
ctcgacaaacgcctcgtgcagctctacccggacgaggccgagcgcgaagcgcaacgcggg
aagtacaaccagcgtctcgatttcgagtgcggcacgatcaagaagatgggctttccgggc
tacttcctgatcgtcgcggacttcatcaactgggcgaagaacaacggcgtgccggtgggc
cccgggcggggctcgggcgcgggctcgctcgtcgcgtattcgctcggcatcaccgacctc
gatccgctgcgctacaacctgctgttcgagcgcttcctgaacccggagcgggtgtcgatg
cccgacttcgacatcgacttctgccagcacggccgcgaccgcgtgatccagtacgtgaag
gagaagtacggcgcggacgcggtgtcgcagatcgccaccttcggcacgatggccgcgaag
gcggccgtgcgggatatcggccgggtgctcgatctcggctacatgttcaccgacggcgtc
gcgaagctgatcccgttcaagccgggcaagcacgtgacgatcgccgacgcgatgaaggaa
gagccgctcctgcaggagcgctacgacaacgaggacgaagtccatcagttgctcgatctc
gcgcagcgcgtggagggcctcacgcgcaacgtcgggatgcacgcgggcggcgtgctgatc
gcgcccggcaagctgaccgatttctgccccctctacacgcagggcgacgaaggcggcgtc
gtcagccagtacgacaaggacgacgtcgaagccgtcggcctcgtgaagttcgactttctc
ggcctcacgacgctcacgattctcgactgggccgagcgctacattcgccgtctcgatccg
agcaaggagaactggtcgctcgcgcaggtgccgctcgacgatccgacgtcgttccagatc
ctcaagaaggccaacacggtcgccgtgttccagctggaaagccgcggcatgcaggggatg
ctgaaggacgcgcagcccgaccgcttcgaggacatcatcgcgctcgtgtcgttgtaccgg
ccgggcccgatggacctgattccgagcttctgcgcgcgcaagcacgggcgcgagaaggtc
gactatccggatccgcgcgtcgagcctgtcctgaaagagacctacgggatcatggtctat
caggagcaggtgatgcagatggcgcagatcatcggcggctattcgctcggcggcgcggac
ttgctgcgtcgcgcgatgggcaagaagaagcccgaggagatggccaagcatcgcgagatc
ttcgccgagggcgccgcgaagaacggcctcacgcgcgagaagtccgacgagatcttcgac
ctgatggagaagttcgcgggctacggcttcaacaagtcgcacgcggccgcgtacgcgctg
ctcgcgtattacaccgcgtggctgaaggcgcaccatccggccgaattcatggcggccaac
atgacgctcgcgatggacgacaccgacaaggtgaagatcctgttcgacgattgcctcgtc
aacggcctcgccgtgctgccgcccgacatcaaccgctcgaactatcgcttcgagcccgtc
gccgaggccgacggcaaacgctcgcgcacgatccgctacggcctcggcgcgatcaagggc
agcggccagaacgcgatcgaggagatcctgcgcgcacgcgaggaaaagccgttcgccgat
ctgttcgatttctgcgagcggatcgaccgccgcgtcgtgaaccgccgcacgatcgaagcg
atgattcgcgcgggcgcattcgattcgctgcacgagaatcgcgcgcagttgctcgcatcg
gtgccgctcgcgatggaggccgccgagcaggcggccgcgaacgcgctgcaggcgggcctg
ttcgacatcggcggcgtgcccgcgcaccagcatgcgctcgtcgacgagccggcgtgggac
gacaagcgtcgcctgcaggaagagaagggcgcgctcggcttctacctgtccggccatctg
ttcgacgcgtatcgcgacgaggtgcgccgtttcgtgcgccagaagctcggcgagctgaag
gaagggcgcgacaaggtggtggccggcgtgatcgcgtcgttgcgcacgcagatgacgcag
cgcggcaagatggtgatcgcgttgctcgacgacggcaccggccagtgcgaagtcaccgtg
ttcaacgagcagttcgacgcgaaccgcgcgctcttcaaggaggacgagctgctgatcgtc
caggggcaggcgcgcaacgacgcgttcacgggcggaattcgcttcaccgccgagtcggtg
atggacctcgagcgtgcgcgcagccgctacgcgcaggcggtgcggatgacgatgaacggc
aacgcggacgcggcggcgctgcgccgcgtgctggaagcgcacgtcgcgaaacccgacgag
acgccgcccgccgcggcgccggcgccgcgcggcggtcgcgacggcgggcggcgggcgcag
gcggcgataccgaatggtctcgccgtgcggatcgcatacagcaacgcgcgtgcgcaaggc
gagatgcgcctgggcgacgcatggcgcgtgaagccgagcgacgcgttgctcgccgatctg
cgcgcggcgttcggcggcagcgtcgtcgagatcgtctactga
DBGET
integrated database retrieval system
