Burkholderia pseudomallei MSHR520: BBX_3369
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Entry
BBX_3369 CDS
T03163
Name
(GenBank) RHS repeat-associated core domain protein
Organism
bpsd
Burkholderia pseudomallei MSHR520
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TcdB_toxin_midN
RHS_repeat
FG-GAP_3
SpvB
FG-GAP
DUF6443
Motif
Other DBs
NCBI-ProteinID:
AHK64887
LinkDB
All DBs
Position
1:3841871..3847966
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AA seq
2031 aa
AA seq
DB search
MAKTSGTADEILNLPSGGGSVSGDGGDFSVDLNTGTATLKFDLTVPAGPNGITPPHTLQY
SAGAGDGAFGIGWSLGLMTIRRRITPATGAAEPAPPGACSLVGVGELVDMGARRFRPIVD
ATGLLIEFTGASWTATDKTDTQYTLGTSANARIGGGALPAAWLVDRCADSAGNAIAYTWL
DVGGARVPQAIAWGTYRLDFVYEARPDVLVDGSYGAPVTLDKRCARIELHATTEAPSLVR
SWTLLYDDGGGRGRSLLATIREQGHAADGSILAAPERTFAYSSPGAPALVPVTGWTTPLS
DPNTDLVDLNGDGLPDIVHLGHGMPTMHPNLGGGQFGAPRPLARTAAPLRLSAPSVAFAD
MSGNGSVDVLVLDAPFSGYYPLAAPGGSAPAGFGRPIVFERAPAVSPSDVRLRFVDLNGD
GITDILLDTGRGWLAYLRDGPASWSDAPRVLPPARTPPVSLADPHVHLADMTGDGLMDIV
RVTGGGLTYWPARADGGWDAAIAMTPSPAFGRDFDPHRLALYDVDGDGCADLVYVGLQSV
TLWRNVGATRLAAPVAIPGTPVALPGSYRIVDLLGSGTAGVHFQLPSIAGASRQSYLDLG
GGVKPYLLTDLAHGAAQSTHIGYRTSTEYARDDAQAGAPWRTYHPFPIQCVARTDQTDHG
TGATTSTRYAYHDARYDPATRTFLGFGRVDSEQLGDASCPTLRVETTFHLGLDPADPARP
LTGDEALKLGALRRKPLVTATYGLDGSPLERRPYSITRHAYDALLVASTADNGKRIAVPY
CTTSTEERWERQSAAVSARTVDYLAITSEGDVTSQRTRAQRAGIAAPDQDVTTTTTLATG
GKNLRLPARVTQTAPGGDIVSESICFYDGDAFAGLPEGQATRGLVTRIEDRVFDDAFVAS
VWGDTPPDLTQYGYHRLPGEAGSWWKTRRAHARGANASGPTLATKGPLGALQTLQYDASG
QRVVKVIDALGNAVAATTDARVFQTASLTDANGHRTADAFDALGRVVATIGPLDTPALPT
IAFTYTVGAISTVTSATRGTHGGADAVPALTWIDGTGNVLGKGTPAAAPGEWTVTHAVRR
NARGLVAASFLPYAATGANWQPPPANTGATTSTYDALGRLVQLTRPDGLVVTSRREGDTL
ITSETWPGGAALDVERQVYDAAGQLVSVSRNAGDHWVEQRYAYAPSGKVRDVMLPGGAHV
AFTLDLLGRVFAQQSPDTGRTVFLLDASDNQRARTNAAGQIVRTEVDAMNRATNVYHDAE
PAPRVRYEYADASGAPPADGIVANRYTRLWRITDEIGTVDFEYDEAGRKTATTRTVAATG
QRFVTRRAYDALGRLARATLPASAPGGAARTIAYGYAADGRLVSASGVVKDAAYDRFGRL
SSIDYENGASTLIDYAANAGGIARVRVLDAARNVLRDTTLTRGGGLVQTLTSAHAGDDSV
DFGYDPLRRLTSAHYRQGATAADAHDWTFDDAFNATAATDAGVLTYEPGTHRLASVGGAA
VAFDAAGRMTSGRFGVATFDAADHLSAVTLPDATHIAHTYDYQGRRVRSTKNGAQTYFSP
IEDIEFQGDTAIVWITFGRQRIAADIGGALTFVHPNALGVMDLITDSGGAYGTRVRQTPF
GYARAADGAAPAGGVAAVALALGAADATGLVCHGLRWYDPRVGQFISPDPVVTSVYTVGA
WNPYVYCLGNPILLADPNGCSFLSVLEIIGVAILAAACVVGAIFTGGATLVALGVLSANI
GGWLLAGVALGSLGGAIAGELAAQKAGGNLWAGAFLGAFLGGATSLIGGALGGAAAAGID
TLIGGTKTFLSFVAAGAIQGTLAGAGTGLAIGYAGGKGNAESMLIAMAKGAAWGAVLGTL
LGAGIGAIAGTGISGAAKPDNFLNIGAFGQKFADFTSTSTAINSADNAAGVTESLAQLSM
PNGFNAGNLLGLLPNLVTTNEQAAGWFSIPIGWLGPGVLNDAGFAGLVDTSMALDQAGFS
YAHQISLLLGAAPYFIDYAATMAQIVDANGVNNFEMAFNNAFGSGSPSNTG
NT seq
6096 nt
NT seq
+upstream
nt +downstream
nt
gtggccaagacaagcggtaccgccgacgagatcctgaacctgccttcgggcggcggatcg
gtcagcggcgatggcggcgatttcagcgtcgatctgaacacgggcaccgcgacgctgaag
ttcgatctgacggtgccggccggcccgaacggcatcacgccgccgcacacgctgcagtat
tcggcgggcgcgggcgacggagcgttcggcatcggctggtcgctcgggctgatgacgatc
cgccgcaggatcacgccggcaacgggcgcggccgagcccgcaccgcccggcgcgtgctcg
ctcgtcggcgtcggcgagctcgtcgacatgggcgcgcgccgctttcggccgatcgtcgac
gcgacggggctgctgatcgaattcacgggcgcgtcgtggacggccaccgacaagaccgat
acgcagtacacgctcggcacgagcgcgaacgcacggatcggcggcggcgcgctgcccgcc
gcatggctcgtcgatcgctgcgccgacagcgcgggcaacgcgatcgcgtacacgtggctc
gacgtcggcggcgcgcgcgtgccgcaggcgatcgcatggggcacgtatcggctcgacttc
gtgtacgaggcgcggcccgacgtgctcgtcgacggcagctacggcgcgcccgtcacgctc
gacaagcgctgcgcccgcatcgagctgcacgcgacgaccgaggcgcccagcctcgtgcgc
agctggacgctgctgtacgacgacggcggcggccgcggccgctcgctgctcgcgacgatc
cgcgaacaaggccacgcggccgacggctcgatcctcgccgcgcccgagcgcacgttcgcg
tactcgtcgcccggcgcgcccgcgctcgtgccggtaacgggctggacgacgccgctgtcg
gacccgaacaccgatctcgtcgacctgaacggcgacgggctgcccgacatcgtgcacctt
ggccatggcatgccgacgatgcatccgaacctcggcggcggacagttcggcgcgccgcgc
ccgctcgcgcgcaccgccgccccgctgcggctgtccgcgccctcggtcgcgttcgcggac
atgtcgggcaacggcagcgtcgacgtgctcgtgctcgacgcgccgttctccggctactac
ccgctggccgcgccgggcggctcggcgcccgcgggcttcggccggccgatcgtgttcgag
cgcgcgcccgccgtctcgccgagcgacgtgcggctgcgcttcgtcgatctgaacggcgac
ggcatcaccgacatcctgctcgacaccggccgcggctggctcgcgtatctgcgcgacggc
ccggcgagctggtccgacgcgccgcgcgtgctgccgcccgcgcgcacgccgcccgtgtcg
ctcgccgatccgcacgtgcatctcgccgacatgacgggcgacgggctgatggacatcgtg
cgcgtgacgggcggcgggctcacgtactggcccgcgcgcgcggacggcggctgggacgcg
gcgatcgcgatgacgccttcgcccgcgttcgggcgcgatttcgatccgcaccggctcgcg
ctgtacgacgtcgacggcgacggctgcgcggatctcgtctacgtcggcctgcaatccgtc
acgctgtggcgcaacgtcggcgcgacgcggctcgccgcgcccgtggcgattcccggcacg
ccggtcgcgctgccgggcagctaccggatcgtcgatctgctcggctcgggcacggcgggc
gtgcatttccaactgccgtcgatcgcgggcgcgtcgcgccagagctatctcgatctcggc
ggcggcgtgaagccgtatctgctgaccgatctcgcgcacggcgcggcgcaaagcacgcat
atcggctaccgcacgagcaccgagtacgcgcgcgacgacgcgcaagccggcgcgccgtgg
cgaacctatcatccgtttccgatccagtgcgtcgcgcgcaccgaccagaccgaccacggc
accggcgcgacgacgtcgacccgctacgcgtatcacgacgcgcgctacgatcccgcgacg
cgcacgttcctcggcttcggccgcgtcgacagcgagcaactgggcgacgcatcgtgcccg
acgctgcgcgtcgagacgaccttccacctcgggctcgatccggccgacccggcccgcccg
ctgacgggcgacgaagcgctgaagctcggcgcgctgcgccgcaagccgctcgtcaccgcg
acgtacgggctcgacggctcgccgctcgagcgccgcccgtattcgatcacgcggcacgcg
tacgacgcgctgctcgtcgcgtcgacggcggataacggcaagcggatcgcggtgccgtac
tgcacgacgtcgaccgaggagcgctgggaacggcagagcgccgccgtatcggcacgcacc
gtcgactatctcgcgatcacgagcgaaggcgacgtcacgtcgcaacgcacgcgcgcgcag
cgcgccggcatcgccgcgcccgaccaggacgtgacgacgacgacgacgctcgccacgggc
ggcaagaacctgagactgccggcgcgcgtcacgcagaccgcgcccggcggggacatcgtg
tccgaatcgatctgcttctacgatggcgacgcgttcgccggcttgcccgaaggccaggcg
acgcgcgggctcgtcacccgcatcgaagatcgcgtgttcgacgacgcgttcgtcgcgtcg
gtctggggcgacaccccgcccgacctcacgcagtacggctaccaccggctgccgggcgaa
gcgggcagttggtggaagacccggcgcgcgcacgcgcgcggcgcgaacgcgagcgggccg
acgctcgcgacgaaaggcccgctcggcgcgctgcagacgctgcaatacgacgcgagcggc
cagcgcgtcgtcaaggtgatcgacgcgctcggcaacgcggtggcggccaccaccgatgcg
cgcgtgttccagaccgcctcgctcaccgatgcgaacggccaccggacggccgacgcgttc
gacgcgctcggccgcgtcgtcgcgacgatcggcccgctcgacacgcccgcgctgccgacg
atcgcgttcacgtacacggtgggcgcgatctcgaccgtcacgagcgcgacgcgcggcacg
cacggcggcgcggacgcggtgccggcgctcacgtggatcgacggcaccggcaacgtgctc
ggcaagggcacgcccgccgccgcgcccggcgagtggaccgtcacccacgcggtgcggcgc
aacgcgcgcggcctcgtcgccgcctcgttcctgccgtacgcggcgacgggcgcaaactgg
cagccgccgcccgcgaacaccggcgcgacgacgtcgacctacgacgcgctcggccggctc
gtgcagctcacgcggccggacgggctcgtcgtcacgagccgccgcgaaggcgacacgctg
atcacgagcgaaacctggccgggcggcgccgcgctcgacgtcgagcggcaggtgtacgac
gcggcgggccagctcgtatcggtctcgcgcaacgcgggcgatcactgggtcgagcagcgc
tacgcgtacgcaccgtcgggcaaggtccgcgacgtgatgctgccgggcggcgcgcacgtc
gcgttcacgctcgacctgctcggccgcgtgttcgcgcagcaaagccccgacacgggccgc
accgtgttcctcctcgacgcatcggacaaccagcgcgcgcgcacgaacgcggcgggccag
atcgtgcgcaccgaagtcgacgcgatgaaccgcgcgacgaacgtgtatcacgacgcggag
ccggcgccgcgcgtgcgctacgagtacgccgacgcgagcggcgcgccgcccgcggacggc
atcgtcgcgaatcgctacacgcgcctctggcggatcaccgacgagatcggcacggtcgac
ttcgaatacgacgaagccggccgcaagaccgcgacgacgcgcaccgtcgcggccaccggg
cagcgcttcgtcacgcggcgcgcatacgacgcgctcggccgcctcgcgcgcgcgacgctg
cccgcgagcgcgccgggcggcgccgcacgcacgatcgcctacggctatgcggccgacggg
cggctcgtcagcgcatcgggcgtcgtgaaggacgcggcctatgatcggttcggacgcctg
agctcgatcgactacgagaacggcgcgtcgacgctgatcgactacgcggcgaacgccggc
ggcatcgcacgcgtgcgcgtgctcgacgccgcgcgcaacgtgctgcgcgacacgacgctc
acgcgcggcggcggcctcgtgcagacgctcacgagcgcgcacgccggcgacgacagcgtc
gacttcggctacgacccgctgcgccgcctgacaagcgcgcactaccggcaaggcgcgacg
gccgccgatgcgcatgactggaccttcgacgacgcattcaacgcgacggccgccaccgat
gcgggcgtgctgacgtacgagccgggcacgcaccggctcgcgtcggttggcggcgcggcg
gtggcgttcgatgccgccggccggatgacgagcgggcgcttcggcgtggcgacgttcgac
gcggccgatcacctgagcgccgtcacgctgccggacgcgacgcacatcgcgcacacgtac
gactaccagggccgccgcgtgcgctcgacgaagaacggcgcgcagacgtatttcagcccg
atcgaagacatcgagttccagggcgacacggcgatcgtgtggatcacgttcggcagacag
cggatcgcggccgacatcggcggcgcgctgacgttcgtgcatccgaacgcgctcggcgtg
atggatctcatcaccgattcgggcggcgcatacggcacgcgcgtgcggcagacaccgttc
ggctacgcgcgagcggccgacggcgcggcgccggcgggcggcgtcgcggcggtggcgctc
gcgctgggcgcggcggacgcgacgggcctcgtatgccacggcctgcgatggtacgacccg
cgcgtcggccagttcatcagcccggacccggtggtgacgagcgtctataccgtcggcgcg
tggaacccgtacgtgtactgcctcggcaatccgatcctgctcgccgatccgaacggctgc
agcttcctgagcgtgctcgagatcatcggcgtcgcgatcctcgcggcggcctgcgtcgtc
ggcgcgattttcacgggcggcgcgacgctcgtcgcgctcggcgtgctgtccgcgaacatc
ggcggatggctgctcgcgggcgtggcgctcggcagcctcggcggcgcgatcgcgggcgag
ctcgccgcgcagaaggcgggcggcaacctgtgggcgggcgcgttcctcggcgcattcctc
ggcggcgcgacctcgctgatcggcggcgcgctcggcggcgcggccgcggccggcatcgac
acactgatcggcggcacgaagacgttcctgtcgttcgtcgcggcgggcgcgatccagggc
acgctcgcgggcgcgggcacggggctcgcgatcgggtacgcgggcggcaagggcaatgcc
gaatcgatgctgatcgcgatggccaagggcgccgcatggggcgcggtgctcggcacgctg
ctcggcgcagggatcggcgcgatcgcgggcacgggcatcagcggcgcggcgaagccggac
aacttcctgaacatcggcgcgttcggccagaagttcgcggatttcacgagcacatcgacg
gcgatcaactcggccgacaacgcggcgggcgtgaccgaatcgctcgcgcagctttcgatg
ccgaacggtttcaacgcgggcaacctgctcggcctgctgccgaacctcgtgacgacgaac
gaacaggcggccggctggttctcgataccgatcggctggctcgggccgggcgtgctgaac
gacgcggggttcgcggggctcgtcgatacgtcgatggcgctcgaccaggcgggattcagc
tacgcgcaccagatctcgctgctgctcggcgcggcgccctacttcatcgactacgcggcg
acgatggcgcagatcgtcgatgcgaacggcgtgaacaacttcgagatggcgttcaacaac
gcgttcgggtcggggagcccgagcaatacggggtga
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