Burkholderia pseudomallei MSHR520: BBX_4335
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Entry
BBX_4335 CDS
T03163
Symbol
polA
Name
(GenBank) DNA polymerase I family protein
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bpsd
Burkholderia pseudomallei MSHR520
Pathway
bpsd03030
DNA replication
bpsd03410
Base excision repair
bpsd03420
Nucleotide excision repair
bpsd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bpsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BBX_4335 (polA)
03410 Base excision repair
BBX_4335 (polA)
03420 Nucleotide excision repair
BBX_4335 (polA)
03440 Homologous recombination
BBX_4335 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpsd03032
]
BBX_4335 (polA)
03400 DNA repair and recombination proteins [BR:
bpsd03400
]
BBX_4335 (polA)
Enzymes [BR:
bpsd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BBX_4335 (polA)
DNA replication proteins [BR:
bpsd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BBX_4335 (polA)
DNA repair and recombination proteins [BR:
bpsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BBX_4335 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBX_4335 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AHK69790
LinkDB
All DBs
Position
2:complement(1036591..1039362)
Genome browser
AA seq
923 aa
AA seq
DB search
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIVNMLRRMRKDVSAEY
SACVFDAKGKTFRDDLYADYKAHRPPMPPDLALQIEPIHTAVRALGWPLLMIEGVEADDV
IGTLAKQAEQHGMNVIVSTGDKDLAQLVTDRVTLINTMTNEALDRDGVLAKFGVPPERIV
DYLSLIGDTVDNVPGVEKCGPKTAVKWLTQYGSLDGVVEHAGEIKGVVGDNLRRALDFLP
LARKLVTVETGCELAPHVESFDASLATDGEGRDALREIFAKYGFKTWLRELDSEPAAAAG
AAAAGAAPDPASGATAELPLATARNYATVQTWEQFDAWLAKISAAELTAFDTETTSLDPM
RAEIVGLSFSVEPGHAAYVPVAHRGPDMPAQLPRDEVLAKLTPWLEDAGKKKLGQHLKYD
AQVLANYGIALNGIEHDTLLESYVLESHRTHDMDSLALRHLGVKTIKYEDVAGKGAQQIG
FDEVPLAQASEYAAEDADITLQLHHALYPQIAREPGLTRVYRDIELPVSLVLRKMERTGV
LIDGDRLSRQSGEIATRLVALEQEAYALAGGEFNLGSPKQIGQIFFERLQLPVVKKTPSG
APSTDEEVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNPDTGRVHTNYAQAVAV
TGRLASNDPNLQNIPVRTAEGRRIREAFVAPPGSKIVSADYSQIELRIMAHISEDESLLR
AFAHGEDIHRATAAEVFGVTPLEVTSDQRRIAKVINFGLIYGMSSFGLASNLGITRDAAK
LYIDRYFLRYPGVARYMEETRMRAKEKGYVETVFGRRLWLPEINGGNGPRRQAAERAAIN
APMQGTAADLIKLSMIAVDDWLERGGLRARMIMQVHDELVLEVPEDELSIVREKLPEMMC
GVAKLKVPLVAEVGVGENWEEAH
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaaatctggaaggtaagaccctgctattggttgacggttcgagctat
ctgtatcgggcttaccatgcgatgcctgatttgcgcggccctggcggggagccgaccgga
gcgctctacggaatcgtcaatatgttgcgccgcatgcgcaaggatgtcagtgcagagtat
agcgcgtgcgtgttcgacgccaagggcaaaaccttccgcgacgatctgtatgccgactac
aaggcgcaccgcccgccgatgccgcccgatctcgcgctgcagatcgagccgatccatacg
gccgtgcgcgcgctcggctggccgctgttgatgatcgagggcgtcgaggccgacgacgtg
atcggcacgcttgcgaagcaggccgaacaacacggcatgaacgtgatcgtctcgacgggc
gacaaggatctcgcgcaactcgtcaccgatcgcgtcacgctcatcaacacgatgacgaac
gaggcgctcgaccgcgacggcgtgctcgcgaagttcggcgtgccgccggagcggatcgtc
gattacctgtcgctcatcggcgacaccgtcgacaacgtgccgggcgtcgagaagtgcggg
ccgaagacggccgtcaagtggctcacgcagtacggctcgctcgacggcgtcgtcgaacat
gcgggcgagatcaagggcgtcgtcggcgacaacctgcgccgtgcgctcgatttcctgccg
ctcgcgcgcaagctggtgacggtcgagaccggctgcgagctcgcgccgcacgtcgaatcg
ttcgacgcgtcgctcgcgacggacggcgagggccgcgacgcgctgcgcgagatcttcgcg
aagtacggcttcaagacgtggctgcgcgagctcgacagcgaacccgccgccgcggccggt
gcggccgccgccggcgccgcgccggatccggcgagcggcgcgacggccgaactgccgctc
gccacggcgcgcaactacgcgaccgtgcagacgtgggagcagttcgacgcgtggctcgcg
aagatctccgccgcagagctgaccgcgttcgacaccgagacgacgtcgctcgacccgatg
cgcgcagagatcgtcggcctgtcgttctcggtggagccgggccatgccgcgtacgtgccg
gttgcgcaccgcgggccggacatgcccgcgcaactgccgcgcgacgaagtgctcgcgaag
ctcacgccgtggctcgaggatgcgggcaagaagaagctcggccagcacctgaagtacgac
gcgcaggtgctcgcgaactacggcatcgcgctgaacggcatcgagcacgacacgctgctc
gaatcgtatgtgctcgaatcgcaccgcacgcacgacatggacagcctcgcgctgcgccat
ctcggcgtgaagacgatcaagtacgaggacgtggcgggcaagggcgcgcagcagatcggc
ttcgacgaggtgccgctcgcgcaggcgtccgagtatgcggcggaagacgccgacatcacg
ctgcagctgcatcacgcgctgtatccgcagatcgcgcgcgagccgggcctcacgcgcgtg
tatcgcgacatcgagctgccggtgtcgctcgtgttgcgcaagatggagcgcaccggcgtg
ctgatcgacggcgacaggctgagccgccagagcggcgagatcgcgacgcggctcgtcgcg
ctcgagcaggaggcgtacgcgctcgcgggcggcgaattcaatctcggctcgccgaagcag
atcggccagattttcttcgagcggctgcaattgcccgtcgtcaagaagacgccgagcggc
gcgccgtcgaccgacgaggaggtgctgcaaaagctcgccgaggactatccgctgccgaag
ctgttgcttgagcaccgcggcctgtcgaagctgaaatcgacctataccgacaagctgccg
cgcatggtcaatccggacacgggccgcgtgcacacgaactatgcgcaggcggtggcggtc
accggacggctcgcgtcgaacgatccgaacctgcagaacatcccggtgcgcacggccgaa
gggcggcgcatccgcgaggcgttcgtcgcgccgccgggcagcaagatcgtgtccgccgac
tattcgcaaatcgagctgcgcatcatggcgcacatctcggaggacgaatcgttgctgcgc
gcgttcgcgcacggcgaggacattcaccgcgcgaccgcggcggaggtgttcggcgtgacg
ccgctcgaagtgacgtccgatcagcggcgcatcgcgaaggtgatcaacttcggtctgatc
tacgggatgagttcgttcggcctcgcgtcgaatctcggcatcacgcgcgatgcggcgaag
ctctatatcgaccgctacttcctccgctatccgggcgtcgcccgctacatggaggaaacg
cgcatgcgggcgaaggagaagggctacgtcgaaaccgtgttcggccgccgcctgtggctg
cccgagatcaacggcggcaacgggccgcgccgccaggccgccgagcgcgcggcgatcaac
gcgccgatgcagggcacggccgccgatctgatcaagctgtcgatgatcgcggtcgacgac
tggctcgagcgcggcggcttgcgcgcgcgaatgatcatgcaggtgcacgacgaactcgtg
ctcgaggtgccggaggacgagctgtccatcgtgcgcgagaagctgccggagatgatgtgc
ggcgtcgcgaaactgaaggtgccgctcgtcgccgaggtcggcgtcggcgagaactgggaa
gaggcgcactga
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