Burkholderia pseudomallei MSHR520: BBX_4875
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Entry
BBX_4875 CDS
T03163
Name
(GenBank) uracil-DNA glycosylase, 4 family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bpsd
Burkholderia pseudomallei MSHR520
Pathway
bpsd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBX_4875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpsd03400
]
BBX_4875
Enzymes [BR:
bpsd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BBX_4875
DNA repair and recombination proteins [BR:
bpsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BBX_4875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AHK67773
LinkDB
All DBs
Position
2:1656608..1657264
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AA seq
218 aa
AA seq
DB search
MARDARAAHSPRRRRAADDDDAPQTLDACRRCGLWEHATQAVPGAGPPRAAIMLVGEQPG
NQEDREGAPFVGPAGRVLERALAAAGLDRASVYVTNAVKHFKWAPRGKRRMHKTPAQQEI
DACRYWLERELDALEPRVVVALGAIALKAVLDDRHARLQPAMGVVQSAGGRYVIATYHPS
FVLRVPDPDARKRAYAAIVEACRIAHELAQRTDGAPRP
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgacgctcgcgccgcgcattcgccgcgccgccgccgtgcggcggacgacgac
gacgcgccgcagacgctcgatgcgtgccgccgttgcgggctctgggagcacgcgacgcag
gcggtgcccggcgcgggcccgccgcgcgcggcgatcatgctcgtcggcgaacagccgggc
aatcaggaagaccgcgagggcgcgccgttcgtcggcccggccgggcgcgtgctcgagcgc
gcgctcgcggcggcggggctcgaccgcgcgagcgtctacgtgacgaacgcggtcaagcac
ttcaaatgggcgccgcgcggcaagcggcggatgcacaagacgcccgcgcagcaggaaatc
gatgcgtgccggtattggctcgagcgcgaactggacgcgctcgagccgcgcgtcgtcgtc
gcgctcggggccatcgcgctgaaggccgtgctcgacgatcgccacgcgcggctgcagccc
gcgatgggcgtcgtgcaatcggcgggcggccgctatgtgatcgcaacctaccacccgtcg
ttcgtgctgcgcgtgcccgatcccgacgcgcgcaagcgcgcgtacgcggcgatcgtcgaa
gcgtgccgcatcgcgcacgagctcgcgcagcgcacggacggcgcaccccggccctga
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