Burkholderia pseudomallei MSHR520: BBX_6165
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Entry
BBX_6165 CDS
T03163
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bpsd
Burkholderia pseudomallei MSHR520
Pathway
bpsd02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bpsd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BBX_6165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpsd03021
]
BBX_6165
Transcription machinery [BR:
bpsd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBX_6165
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
PhyR_sigma-like
HTH_7
HTH_29
GerE
DnaG_DnaB_bind
HTH_40
HTH_24
TnsD
HTH_11
HTH_20
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AHK68683
LinkDB
All DBs
Position
2:3310413..3310922
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AA seq
169 aa
AA seq
DB search
MPANTLRLQREIAALYTGHRGWLHGWLSKKLGCGERAADLVHDTFIRLLARDEPIDAAEP
RAFLTTVAQRVLYNHWRRERLERAYLDALAQWPEAVAPSPETRAVLFETLVEIDRMLDGL
PAVVRRAFLLAQLDGMTHAQIAAELRVSLATVKRYLVKAGAQCYFAIAA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgccggccaacactttgcgtctgcagcgggagatcgctgcgctctataccggtcatcgc
ggctggctgcacggctggctgtcgaagaagctcggctgcggcgagcgcgcggccgatctg
gttcacgacacgttcatccgcctgctcgcacgcgacgagccgatcgacgcggccgagccg
cgcgcgttcctgacgaccgtcgcgcagcgcgtgctgtacaaccactggcggcgcgagcgg
ctcgagcgcgcgtatctcgacgcgctcgcgcaatggccggaggcggtcgcgccgtcgccg
gagacacgcgccgtcctgttcgagacgctcgtcgagatcgaccggatgctcgacgggctg
cccgccgtcgttcgccgcgcgttcctgctcgcgcagctcgacggcatgacgcacgcgcag
atcgcggccgagctgcgcgtgtcgctcgcgaccgtcaagcgctacctggtgaaagcgggc
gcgcagtgctacttcgcgatcgccgcatga
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