Burkholderia pseudomallei MSHR305: BDL_3140
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Entry
BDL_3140 CDS
T02756
Name
(GenBank) FAD binding domain of DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bpse
Burkholderia pseudomallei MSHR305
Brite
KEGG Orthology (KO) [BR:
bpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpse03400
]
BDL_3140
Enzymes [BR:
bpse01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BDL_3140
DNA repair and recombination proteins [BR:
bpse03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BDL_3140
Prokaryotic type
BDL_3140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
LPD1
Motif
Other DBs
NCBI-ProteinID:
AGR72368
LinkDB
All DBs
Position
2:3603339..3604799
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AA seq
486 aa
AA seq
DB search
MSSSISIAPAVVWFRDDLRVSDHPALMRAAESGRPVIGVYVFDERAGGRPLGGAARWWLH
GSLRALGAALAALGGTLALLRGDEHDTIVSFAAALGAGAVYWSRRYALAARAVDNAVQTA
LDAQGIAVETFNASLLFEPGDLVNADGRPYQVFSAYWRAAMRRGVPAPPLGAPRRLNGGA
LPAALARQCVALDALGLEPTGPDWAGGLRDAWRFGEDAAHRRLRAFVDSRLGGYAAERDR
PGIASTSRLSPYVRFGNLSARQLWHAAADAYAHGAATQADLDKFLSELGWREFGWTQLHH
FPDLPRRNLRHTLDGMPWRDDPAALAAWRRGATGYPFVDAGMRELWATGWMHNRVRMVCA
SFLVKHLLIDWRAGEAWFWDTLVDADAASNAANWQWVAGCGADAAPYFRIFNPVAQGRKF
DPDGAYVRRWVPELAGLPPATIHEPWAAPGAQLAAAGVRLGETYPLPIVAHDAARRRALD
AFGAIR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttcatccatctcgattgcgcccgccgtcgtctggtttcgcgacgatctgcgcgtg
tccgatcatcccgcgctcatgcgcgccgccgagtcggggcgccccgtgatcggcgtctac
gtgttcgacgagcgcgctggcgggcggccgctgggcggcgcggcgcgctggtggctgcac
ggctcgttgcgcgcgctcggcgcggcgctcgccgcgctgggcggcacgctcgcgctgctg
cgcggtgacgagcacgatacgatcgtttcgttcgccgcggcgctcggcgcgggcgccgtc
tactggagccgccgctatgcgcttgccgcgcgcgcggtcgacaacgcggtgcagacggcg
ctcgacgcgcagggcatcgcggtcgagacgttcaacgcgagcctgctgttcgagccgggc
gacctcgtcaacgcggacggccgcccgtatcaggtgttcagcgcgtactggcgcgcggcg
atgcgccgcggcgtgccggcaccgccgctcggcgcgccgcggcgcctgaacggcggcgcg
ctgccggcggcgctcgcgcggcagtgcgtggcgctcgacgcgctcgggctcgagccgacg
ggcccggactgggcgggcggcctgcgcgacgcatggcgtttcggcgaggacgccgcgcac
cgtcggctgcgcgccttcgtcgacagccggctcggcggctatgcggccgagcgcgaccgg
ccgggcatcgcgtcgacgagccggctgtcgccgtacgtgcgcttcggcaacctgtcggcg
cggcagctctggcatgcggccgccgacgcgtacgcgcacggcgcggcgacccaggcggac
ctcgacaagtttctgagcgagctcggctggcgggagttcggctggacccagttgcaccac
tttccggacctgccgcgccgcaacctgcgccacacgctcgacggcatgccgtggcgcgac
gatcccgccgcgcttgccgcatggcggcgcggcgccacgggctatccgttcgtcgacgcc
ggcatgcgcgagctctgggcgacgggctggatgcacaaccgcgtgcggatggtatgcgct
tcgtttctcgtcaagcacttgctgatcgactggcgggcgggcgaggcgtggttctgggac
acgctcgtcgacgcggacgcggcgtcgaacgccgcgaactggcagtgggtcgcgggctgc
ggcgcggatgccgcgccgtatttccggatcttcaatccggtcgcgcagggccggaagttc
gatccggacggcgcctatgtgcggcgctgggtgcccgagctggccggcctgccgcccgcg
acgatccacgagccgtgggcggcgcccggcgcgcagctcgccgcggcaggcgtgcggctc
ggcgagacttatccgctgccgatcgtcgcgcacgatgccgcgcgccggcgagcgctcgac
gcattcggggcaatcagatga
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