Burkholderia pseudomallei MSHR305: BDL_43
Help
Entry
BDL_43 CDS
T02756
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bpse
Burkholderia pseudomallei MSHR305
Pathway
bpse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bpse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BDL_43 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpse03021
]
BDL_43 (rho)
03019 Messenger RNA biogenesis [BR:
bpse03019
]
BDL_43 (rho)
Transcription machinery [BR:
bpse03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BDL_43 (rho)
Messenger RNA biogenesis [BR:
bpse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BDL_43 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGR70180
LinkDB
All DBs
Position
2:complement(42374..43597)
Genome browser
AA seq
407 aa
AA seq
DB search
MIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPDGFGFLRSPEMSYL
ASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVNGQPPEASKHKIMF
ENLTPLHPNKPLSLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASPKSGKTVMLQHIAH
AIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHVQVAEMVIEKAKRL
VEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRFFGAARNIEEGGSL
TIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINLNKSGTRREEMLIK
PEILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKNNAEFFDLMRRGG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgaaatggccaatggtctggagatcgaaaacgcgaaccgcctgcgcaagcaggag
ttgatgttcgccattctcaaaaagcgcgccaagacgggagaaacgatcttcggcgacggc
acgctcgaagtgctgccggacggtttcggcttcctgcgctcgccggaaatgtcgtatctc
gcgagcacggacgacatctacatcagcccgtcgcagatccgccgcttcaatctgcacacc
ggcgacacgatcgaaggtgaagtccgcacgccgaaggacggcgagcgctacttcgcgctg
gtgaaggtcgacaaagtcaacgggcagccgcccgaggcctcgaaacacaagatcatgttc
gagaacctcacgccgctgcacccgaacaagccgctgtcgctcgagcgcgaaatgcgcggc
gaggaaaacgtcacgggccgcatcatcgacatgatcgcgccgatcggcaagggccagcgc
ggcctgctcgtcgcgtcgccgaagtccggcaagaccgtgatgctccagcacatcgcgcac
gcgatcaagcagaaccatccggacgtgatcctgttcgtgctactgatcgacgagcgcccc
gaggaagtgaccgaaatgcagcgctcggtcgccggcgaagtgatcgcgtcgacgttcgac
gaaccggccacgcgccacgtgcaggtcgccgaaatggtgatcgagaaggccaagcgcctc
gtcgagatgaagcacgacgtcgtgatcctgctcgactcgatcacgcgtctcgcgcgcgcc
tacaacaccgtgatcccggcgtccggcaaggtgctgacgggcggcgtcgacgcgaacgcg
ctgcagcgcccgaagcgcttcttcggcgcggcgcgcaacatcgaggaaggcggctcgctc
acgatcatcggcaccgcgctgatcgaaaccggcagccgcatggacgacgtgatctacgaa
gaattcaagggcaccggcaacatggaagtgcacctcgagcgccgtctcgcggaaaagcgc
gtctacccgtcgatcaacctgaacaagtcgggcacgcgccgcgaggaaatgctgatcaag
cccgagatcctccagaagatctgggtgctgcgcaagttcatccacgacatggacgaagtc
gaggcgatggaattcctgctcgacaagatccgccagacgaagaacaacgccgagttcttc
gatctgatgcgccgcggcggctga
DBGET
integrated database retrieval system
