KEGG   Burkholderia pseudomallei MSHR305: BDL_4587
Entry
BDL_4587          CDS       T02756                                 
Name
(GenBank) DEAD/H associated family protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
bpse  Burkholderia pseudomallei MSHR305
Brite
KEGG Orthology (KO) [BR:bpse00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpse03400]
    BDL_4587
Enzymes [BR:bpse01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BDL_4587
    5.6.2.6  RNA 3'-5' helicase
     BDL_4587
DNA repair and recombination proteins [BR:bpse03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BDL_4587
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr DEAD Helicase_C WH3_Lhr ResIII DprA_WH HTH_IclR
Other DBs
NCBI-ProteinID: AGR69550
LinkDB
Position
1:1379585..1384408
AA seq 1607 aa
MHATPARPAAGALDAFHPVVAAWFSDTFAAPTGAQTLAWPHIKAGRSTLVAAPTGSGKTL
TAFLSALDDLVRDALAHDGALPDETLVVYVSPLKALSNDIHVNLEAPLAGIAAEIARRGL
PVPQIRTAVRTGDTTQAERVAHRKHAPHILVTTPESLYVLLSSESGRRMLASTRTVIVDE
IHALANAKRGSHLALSLERLDALVGRKLPRIGLSATQKPVEAVARFLVGGRDDAPLDCAI
VDTGHTRTRDLALELPPVPLGPVMANDVWERLYDRIAELAAAHRTTLVFVNTRRMAERAA
RHLADRLGADAIAAHHGSLAKEHRFDAEQRLKHGKLKLLVATASLELGIDIGDVELVCQL
GSPRGIAPFLQRVGRSGHHIGGVPKGRLFPLSRDELVECAALLDCVRRGELDVLRIPRAP
LDVLAQQLVAEVACREWDEHALYRCVTQAAPYATLARETFDEVLKMLAEGFTSRRGARAA
YLHRDVVAHTVRGRRGARLAAVTSGGTIPDNADYAVLLEPQGVNIGTVNEDFAVESLAGD
VFQLGNQSYRIIRIETGRVRVEDAHGQAPNIPFWLGEAPARSDELSAGVARLRARLDALL
ARGDAAGAGAALPVNAASAPAPEREAAAAGQGARARAAAPHGTPALARRALPAALPAAPP
AAPPAVCARAAPSAAAPSTAAPSTAIPSAAAPTVAAMPVSPEAELRAEPRRLAPALAWLT
GELGLDAEAARQIADYLARARAALGALPTQDTLVMERFFDESGGMQLVIHSPYGSRINRA
WGLALRKRFCRSFNFELQAAATDDALILSLSHAHSFALDEVWRYLRASSAEHVLIQALLD
APLFAARWRWNATTSLALPRFAGGRKVAPQLQRMKSKDLLATVFPDQVACAENIVGEREV
PKHPLVDQTLDDCLHDAMDTEGWLALLRRIEAGDVALVARDLPAPSPLAAEILNAKPYAF
LDDAPLEERRTQAVLARRWSDPESADDLGALDAGAIEAVRDEAWPLVREPDEMHDALVGL
ACIADDEIASHDGWRACVAQLAAGGRAARLALAGGRGLWIAAERVACMRALYGADVALDP
PLAPPPGFDAPWEPEAALVDVIRARLTGFGPVTAAALAAPLALPAASVAIALAALEREGY
VMRGRFTPGARDDEWCERHLLARIHRYTVKRLRREIEPVELADFMRFLFHWQRVAPDTRG
LGGDALAAVVHQLEGFEAAASAWEDEILPARLADYVAGGLDEPCRAGKLTWTRLGAPAKA
ASAPVKTTPVVLLPRRELAIWQALRDPAAQPALSARAERVRATLAAYGAMFFDELAAHAR
LLPVELERALGELVAAGLVNADSFAGLRALLRPAAQRGAQRPSRARRGGALIGGMDDAGR
WALVQRLPLAPLDFGEGGSEDEAANDDDAPSGDGTPGAGPEAARRGGVREGGAEADARIA
RAMRAAPPQAGRHAIAPAALEHVARTLLRRYGVVFWRLLACEAEWMPSWRELLPVYRRLE
ARGEIRGGRFVAGLAGEQFALPDAIPILRELRRRPAEGLMLCVSGADPLNLTGTLLPGER
VPALAGNRILFRDGVPIASLVGGQFAFARELDALAQDRARARLARHR
NT seq 4824 nt   +upstreamnt  +downstreamnt
atgcacgccactcccgcccgccctgccgccggcgcgctcgacgcgttccaccccgtcgtc
gccgcctggttctccgacacgttcgccgcgcccaccggcgcgcaaacgctcgcgtggccg
cacatcaaggccggccgctcgacgctcgtcgccgcgccgacgggctccggcaaaacgctc
accgcattcctgtccgcgctcgacgatctcgtgcgcgacgcgctcgcgcatgatggcgcg
ctgcccgacgagacgctcgtcgtctacgtgtcgccgctgaaagcgctgtcgaacgacatt
cacgtgaacctcgaagcgccgctcgccggcatcgccgccgaaatcgcgcggcgcgggctg
ccggtgccgcaaatccgcaccgccgtgcgcaccggcgacacgacccaggccgagcgcgtc
gcgcatcgcaagcacgcgccgcacattctcgtcacgaccccggaatcgctgtacgtgctg
ctgtcgtccgaatcgggccggcgcatgctcgcgagcacgcgcaccgtgatcgtcgacgaa
atccacgcgctcgcgaacgccaagcgcggcagccatctcgcgctgtcgctcgagcggctc
gacgcgctcgtcggccgcaagctgccgcgcatcgggctgtccgcgacgcaaaagccggtc
gaggcggtcgcgcgctttctcgtcggcggccgcgacgacgcgccgctcgattgcgcgatc
gtcgacaccggccacacgcgcacgcgcgatctcgcgctggaattgccgcccgtgccgctc
gggcccgtgatggcgaacgacgtgtgggagcgcctctacgatcgcatcgcggagctggcc
gccgcgcaccgcacgacgctcgtgttcgtcaacacgcgccggatggccgagcgcgcggcc
cgccatctggcggacaggctcggcgcggacgcgatcgccgcgcaccacggcagcctcgcg
aaggaacatcgcttcgacgccgagcagcgcctgaagcacggcaaactcaagctgctcgtc
gccacggcctcgctcgagctcggcatcgacatcggcgacgtcgagctcgtctgccagctc
ggctcgccgcgcggcatcgcgccgttcctgcagcgcgtcgggcgctccgggcaccatatc
ggcggcgtgccgaaggggcggctctttccgctgtcgcgcgacgaactcgtcgaatgcgcg
gcgctcctcgattgcgtgcggcgcggcgagctcgacgtgctgcgcattccgcgcgcgccg
ctcgacgtgctcgcgcagcagctcgtcgccgaagtcgcctgccgcgaatgggacgagcac
gcgctctatcgctgcgtgacgcaggccgcgccctacgcgacgctcgcgcgcgagacgttc
gacgaggtgctgaagatgctcgccgagggcttcacgagccggcgcggcgcgcgcgccgcg
tacctgcaccgcgacgtcgtcgcgcacacggtgcgcgggcggcgcggcgcgcggctcgcg
gccgtcacctcgggcggcacgattcccgataacgccgactacgcggtgctgctcgagccg
cagggcgtgaacatcggcaccgtcaacgaggatttcgcggtcgaaagcctcgcgggcgac
gtgttccagctcggcaaccagtcgtaccggatcatccggatcgagacggggcgcgtgcgc
gtcgaggatgcgcacgggcaggcgccgaacatcccgttctggctcggcgaggcgcccgcg
cgcagcgacgagctgtcggcgggcgtcgcgcggctgcgcgcgcggctcgacgcgctgctc
gcgcgcggcgatgcggccggcgcgggtgcggccttgccggtgaacgccgcatccgcgccg
gcgcccgagcgcgaagcggccgcggccggccaaggcgcgcgtgcgcgcgccgccgcgccg
cacggcacgcccgccctcgcgcgccgcgctttgcccgctgcgctgcccgccgcaccgccc
gccgcaccgcccgccgtctgcgcgcgcgccgccccatccgccgccgccccgtctaccgcc
gccccgtctaccgccatcccgtccgccgccgcgccgaccgtcgccgcgatgccggtctcc
cccgaggcggaactccgcgccgagccgcgccgcctcgcgcccgcgctcgcgtggctcacg
ggcgagctcggcctcgatgccgaagccgcgcggcagatcgccgattacctcgcgcgcgcc
cgcgcggcgctcggcgcgctgccgacgcaggacacgctcgtgatggagcgcttcttcgac
gaatcgggcggcatgcagctcgtgatccattcgccgtatggctcccggatcaaccgcgcg
tggggcctcgcgctgcgcaagcgcttctgccgcagcttcaacttcgagctgcaggcggcc
gcgaccgacgacgcgctgatcctgtcgctgtcgcacgcgcacagcttcgcgctcgacgag
gtgtggcgctacctgcgcgcgtcgagcgccgagcacgtgctgatccaggcgctgctcgac
gcgccgctgttcgccgcgcgctggcgctggaacgcgacgacgtcgctcgcgttgccgcgc
ttcgccggcggccgcaaggtcgcgccgcaactgcagcggatgaagagcaaggatctgctc
gcgacggtgttccccgatcaggtcgcgtgcgcggagaacatcgtcggcgagcgcgaggtg
ccgaagcacccgctcgtcgaccagacgctcgacgactgcctgcacgacgcgatggacacc
gagggctggctcgcgctgctgcggcggatcgaggcgggcgacgtcgcgctcgtcgcgcgc
gatctgcccgcgccttcgccgctcgccgccgagatcctgaacgcgaagccgtacgcgttc
ctcgacgatgcgccgctcgaggagcgccgcacgcaggcggtgctcgcgcggcgctggagc
gacccggaatcggccgacgatctcggcgcgctcgacgcgggcgcgatcgaagcggtgcgc
gacgaggcgtggccgctcgtgcgcgagcccgacgagatgcacgacgcgctcgtcgggctc
gcgtgcatcgccgacgacgaaatcgcgtcgcacgacggctggcgcgcgtgcgtcgcgcag
ctcgcggcgggcgggcgcgcggcgcggctcgcgctcgcgggcggccgcgggctgtggatc
gcagccgagcgcgtcgcgtgcatgcgcgcgctgtacggcgcggacgtcgcgctcgacccg
ccgctcgccccgccgcccggcttcgatgcgccgtgggagcccgaggccgcgctcgtcgac
gtgatccgcgcgcgcctcacgggtttcgggccggtcacggccgccgcgctcgccgcgccg
ctcgcgctgcccgccgcgtcggtcgcgatcgcgctcgccgcgctcgagcgcgagggctac
gtgatgcgcgggcgcttcacgccgggcgcgcgcgacgacgaatggtgcgagcggcacctg
ctcgcgcgcatccatcgctatacggtcaagcgcctgcggcgcgagatcgagcccgtcgag
ctcgcggatttcatgcgcttcctgtttcactggcagcgcgtcgcgcccgacacgcgcggc
ctgggcggcgacgcgctcgcggcggtcgtccaccagctcgaaggtttcgaggcggccgcg
agcgcgtgggaggacgaaatcctgcccgcgcggctcgccgattacgtggcgggcggcctc
gacgagccgtgccgcgccggcaagctgacgtggacgcggctcggcgcgccggcgaaggcc
gcgagcgcgccggtgaagacgacgcccgtcgtgctgttgccgcgccgcgagctcgcgatc
tggcaggcgctgcgcgatccggccgcgcagccggcgctgtcggcacgcgccgaacgcgtg
cgcgcgacgctcgccgcgtacggcgcgatgttcttcgacgaactggccgcgcacgcgcgg
ctgctgcccgtcgagctcgaacgcgcgctcggcgagctcgtcgccgcaggcctcgtcaac
gcggacagcttcgcgggcctgcgcgcgctgctgcggccggccgcgcagcgcggcgcgcag
cggccgtcgcgcgcacggcgcggcggcgcgctgatcggcgggatggacgacgcggggcgc
tgggcgctcgtgcagcggctgccgctcgcgccgctcgattttggcgagggcggcagcgaa
gacgaagccgcaaatgatgacgatgccccgtccggcgacggcacgcccggcgccggcccc
gaagccgcgcgccgcggcggcgtgcgcgaaggcggcgccgaagccgatgcccgcatcgcg
cgcgcgatgcgggccgcgccgccgcaagcgggccgccatgcgatcgcgcccgccgcgctc
gagcacgtcgcgcgcacgctgctgcgccgctacggcgtcgtgttctggcgcctcctcgca
tgcgaagccgaatggatgccgagctggcgcgagctgctgcccgtctatcggcggctcgag
gcgcgcggcgaaatccgcggcggccgcttcgtcgcgggcctcgcgggcgaacagttcgcg
ctgcccgacgcgatcccgatcctgcgcgagctccgccgccggccggccgaagggctgatg
ctgtgcgtgagcggcgccgatccgctcaatctgacgggcacgctgctgcccggcgaacgc
gtgcccgcgctcgcgggcaaccggatcctgttccgcgacggcgtgccgatcgcctcgctc
gtcggcgggcagttcgcgttcgcgcgcgaactcgacgcgctcgcgcaggaccgcgcgcgg
gcgcgactcgcgcggcatcggtaa

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