Burkholderia pseudomallei MSHR305: BDL_5154
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Entry
BDL_5154 CDS
T02756
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bpse
Burkholderia pseudomallei MSHR305
Pathway
bpse02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bpse00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BDL_5154 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bpse03021
]
BDL_5154 (rpoD)
Transcription machinery [BR:
bpse03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BDL_5154 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AGR69783
LinkDB
All DBs
Position
1:complement(2102901..2104943)
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AA seq
680 aa
AA seq
DB search
MTKKLNEVSVDDDANQSDDQPTAASGKGEKAKARDRRAKEKALLKEAFATSTPGTAEELE
ERRTKLRALIKLGKERGFLTYAEINDHLPDNFTETEALEGIIGTFNDMGVAVYEQAPDAE
TLLLNDNAPAASSDDEVEEEAEVALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIEI
AKRIEDGLRHMVMAISACPTTIADILAMAERVANEESRVDELVDGLIDPNAADTDGFSEK
DAEEIENEDAEAEEDDEEEEEDDDGAAQATANAAQLEALKRASLEKFALISEWFDKMRRA
FEKEGYKSKSYLKAQETIQNELMSIRFTARTVERLCDTLRAQVDEVRQVERQILHIVVDK
CGMPRSEFIARFPGSETDLDWAEKVAAEGHSYGAILSRNIPAIREQQQRLLDLQARVVLP
LKDLKETNRQMAAGELKARQAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMK
AVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQILQET
GLEPDPATLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDTNTVAPADA
ALHASMRDVVKDVLDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQIEAKA
LRKLRHPSRSDKLKSFLEGN
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaagctgaacgaagtatccgtcgatgacgacgcaaaccagagcgacgaccag
cctaccgctgcgtcgggcaaaggcgaaaaggccaaggcgcgcgaccgtcgcgccaaggaa
aaggcgctgctgaaggaagcgttcgcgacgagcacgcccggcacggccgaggagctcgaa
gagcgccgtacgaagctgcgcgcgctgatcaagctcggcaaggagcgcggcttcctcacg
tacgccgaaatcaacgaccatctgccggacaacttcacggaaacggaagcgctcgaaggc
atcatcggcacgttcaacgacatgggcgtcgcggtgtacgagcaggcgcccgacgccgag
acgctgctgttgaacgacaatgcgcccgccgcgtcgtccgacgatgaagtcgaggaggaa
gcggaagtcgcgctgtcgaccgtcgattccgaattcggccgcacgaccgatccggtgcgg
atgtacatgcgcgagatgggcacggtcgagctgctcacgcgcgaaggcgaaatcgagatc
gcgaagcggatcgaggacggcctgcgccacatggtgatggcgatttccgcgtgcccgacg
acgatcgccgacatcctcgcgatggccgagcgcgtggcgaacgaggagagccgcgtcgac
gagctagtcgacggcctgatcgatccgaacgccgccgataccgacggcttctcggagaag
gacgccgaggaaatcgagaacgaggacgcggaagccgaagaggacgacgaagaggaagaa
gaggacgacgacggcgccgcgcaggcgaccgccaacgcggcccagctcgaagcgctcaag
cgcgcgtcgctcgagaagttcgcgctcatcagcgaatggttcgacaagatgcgccgcgcg
ttcgagaaggaaggctacaagtcgaagtcgtacctgaaggcgcaggaaacgatccagaac
gagctgatgtcgatccgcttcaccgcgcgcaccgtcgagcgcctgtgcgatacgctgcgc
gcgcaggtcgacgaagtgcgccaggtcgagcgtcagatcctgcatatcgtcgtcgacaag
tgcgggatgccgcgctcggagttcatcgcgcgcttcccggggagcgagaccgatctcgac
tgggccgagaaggtcgcggccgaaggccattcgtatggggcgatcctgtcgcgcaacatt
ccggcgatccgcgaacagcagcagcgcctgctcgacctgcaggcgcgcgtcgtgctgccg
ctcaaggacctgaaggaaaccaaccgccagatggcggcgggcgaactgaaggcgcgccag
gcgaagcgcgagatgaccgaggcgaacctgcgcctcgtgatctcgatcgcgaagaagtac
acgaaccgcggcctgcagttcctggacctgattcaggagggcaacatcggcctgatgaag
gcggtggacaagttcgaataccgtcgcggctataagttctcgacgtatgcgacgtggtgg
atccgccaggccatcacgcgctcgatcgcggaccaggcgcgcacgatccggattccggtt
cacatgatcgagacgatcaacaagatgaaccgcatctcgcggcagatcctgcaggaaacc
ggcctcgagccggatccggcgacgctcgccgagaagatggagatgccggaggacaagatc
cgcaagatcatgaagatcgcgaaggagccgatctcgatggaaacgccgatcggcgacgac
gacgattcccatctcggcgacttcatcgaggacaccaacacggtcgcgccggcggatgcc
gcgctgcatgcgagcatgcgcgacgtcgtgaaggacgtgctcgattcgctgacgccgcgc
gaggcgaaggtgctgcggatgcgcttcggcatcgagatgagcaccgatcacacgctcgag
gaagtcggcaagcagttcgacgtcacgcgcgagcggattcgtcagatcgaggcgaaggcg
ctgcgcaagctgcgtcatccgagccgttcggacaagctgaagtcgttcctcgaggggaac
tga
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