Burkholderia pseudomallei MSHR305: BDL_55
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Entry
BDL_55 CDS
T02756
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bpse
Burkholderia pseudomallei MSHR305
Brite
KEGG Orthology (KO) [BR:
bpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bpse03009
]
BDL_55 (rumA)
Enzymes [BR:
bpse01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BDL_55 (rumA)
Ribosome biogenesis [BR:
bpse03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BDL_55 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRM5-TYW2_MTfase
Methyltransf_23
Cons_hypoth95
RrnaAD
Methyltrans_SAM
Methyltransf_11
MTS
Methyltransf_15
PCMT
N6_N4_Mtase
Methyltr_RsmB-F
Ubie_methyltran
TRAM
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
AGR71913
LinkDB
All DBs
Position
2:55465..56769
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AA seq
434 aa
AA seq
DB search
MEARGVGRVVDENGEPGKVIFVEGALPGERVTYSSFRRKPTYEQAQVVDILRPSVMRTQP
KCAFFGTCGGCSMQHLDMRAQVAIKQRVLEDNLWHLAKLRAEAMFAPIHGPSWGYRYRAR
LTVRHVAKKGGVLVGFHEKKSSYVADMTSCEVLPPHVSAMLVPLRRLVEQLSIRDRMPQI
ELAVGARVTALVLRVLEPINAADEALLREFADTHRVQFWLQPKGPDTVAPFYPLDAQLDY
TLPEFGIRMPFKPTDFTQVNHQINRVLVGRALRLLAPERGDRVLDLFCGIGNFTLPLARL
AREVVGIEGSDALTARALENAKENGVDGHTSFACRNLFEVTSDDLRALGAFDKFLVDPPR
EGALAVSKALAEIAQSGAGPLPTRIVYVSCNPSTLARDAGLLVHEAGYRLKGAGVVNMFP
HTSHVESIALFERD
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcgcggcgtcggccgcgtcgtcgacgaaaacggcgagcccggcaaggtgatt
ttcgtcgagggcgcgttgcccggcgagcgcgtcacttattcgagctttcgccgcaagccg
acctacgagcaggcgcaggtcgtcgatattctgcgcccgagcgtgatgcgcacgcagccg
aaatgcgcgttttttggcacgtgcggcggctgctcgatgcagcatctcgacatgcgcgcg
caggtcgcgatcaagcagcgcgtgctcgaggataacctctggcatctcgcgaagctgcgt
gccgaggcgatgttcgcgccgattcacgggccgtcgtggggctatcgctatcgtgcgcgc
ctcaccgtgcgccatgtcgcgaagaagggcggcgtgctcgtcggcttccacgagaaaaag
agcagctacgtggccgacatgacgagctgcgaagtgctgccgccgcacgtgtcggcgatg
ctcgtgccgctgcgccggctggtcgagcaattatcgatccgcgatcgcatgccgcagatc
gagctcgcggtcggcgcccgggtgacggcgctcgtgctgcgcgtgctcgagccgatcaac
gcggccgacgaggcgctcctgcgcgaattcgccgacacgcatcgcgtgcagttctggctg
cagccgaaagggccggatacggtcgcgccgttctatccgcttgacgcgcagctcgattac
acgctgccggaattcgggatccggatgccgttcaagccgaccgatttcacgcaggtcaat
caccagatcaaccgcgtgctcgtcggccgcgcgctgcggctgctcgcgcccgaacgcggc
gatcgcgtgctcgatctgttctgcgggatcggcaactttacgctgccgctcgcgcggctc
gcacgcgaagtggtcggcatcgagggcagcgacgcgctgactgcgcgcgcgctcgagaat
gcgaaggaaaacggcgtcgacggccatacgtcgttcgcgtgccgtaacctgttcgaggtg
acgtcggacgatctgcgcgcgctcggcgcattcgacaagttcctggtcgatccgccgcgc
gaaggcgcactcgcggtatcgaaggcgctcgccgagatcgcacaaagcggcgcggggccg
ttgcccacgcggatcgtgtacgtgtcgtgcaacccgtcgacgctcgcgcgagacgcgggg
ctcctcgtgcacgaggcgggttatcggctcaagggcgcgggcgtcgtcaacatgttcccg
catacctcgcatgtcgaatcgatcgcgctgttcgagcgcgattga
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